Gene family

• Hmmer

  Based on Hidden Markov Model

• Pfam

  Identification of gene structural domains

• MEME Suite

  Motif Analysis Baobab

• Cpgfinder

  Analysis of potential regions of CpG islands

• Codonw

  Codon preference analysis

• GSDS

  Gene structure mapping

• Sequence alignment

  Multiple sequence alignment tool

• IQ tree

  Phylogenetic tree building tool

• FastTree

  Phylogenetic tree building tool

• Phyml

  Building evolutionary trees

MEME Suite