Dotplot type | Number |
---|---|
Blastp | 729 = 27 ✖ 27 |
Block | 676 = 26 ✖ 26 |
Ks | 676 = 26 ✖ 26 |
Type | Number |
---|---|
MCScanX-Colinearity | 729 = 27 ✖ 27 |
MCScanX-tandem | 729 = 27 ✖ 27 |
KaKs | 729 = 27 ✖ 27 |
ColinearScan | 729 = 27 ✖ 27 |
Events | Genome | Number |
---|---|---|
Caesalpinioideaeva common tetraploidy | Senna tora | 298 |
Lupine specific hexaploidy | Lupinus albus | 4,051 |
Lupine specific hexaploidy | Lupinus angustifolius | 2,514 |
Papilionoideae common tetraploidy | Arachis duranensis | 776 |
Papilionoideae common tetraploidy | Amphicarpaea edgeworthii | 1,043 |
Papilionoideae common tetraploidy | Aeschynomene evenia | 643 |
Papilionoideae common tetraploidy | Arachis hypogaea | 8,393 |
Papilionoideae common tetraploidy | Arachis ipaensis | 949 |
Papilionoideae common tetraploidy | Arachis monticola | 1,593 |
Papilionoideae common tetraploidy | Abrus precatorius | 1,724 |
Papilionoideae common tetraploidy | Cicer arietinum | 154 |
Papilionoideae common tetraploidy | Cajanus cajan | 1,658 |
Papilionoideae common tetraploidy | Dalbergia odorifera | 763 |
Papilionoideae common tetraploidy | Glycine max | 5,434 |
Papilionoideae common tetraploidy | Glycine soja | 4,878 |
Papilionoideae common tetraploidy | Lupinus albus | 2,513 |
Papilionoideae common tetraploidy | Lupinus angustifolius | 1,394 |
Papilionoideae common tetraploidy | Lotus japonicus | 254 |
Papilionoideae common tetraploidy | Melilotus albus | 888 |
Papilionoideae common tetraploidy | Medicago truncatula | 1,070 |
Papilionoideae common tetraploidy | Pisum sativum | 68 |
Papilionoideae common tetraploidy | Phaseolus vulgaris | 945 |
Papilionoideae common tetraploidy | Vicia faba | 825 |
Papilionoideae common tetraploidy | Spatholobus suberectus | 1,266 |
Papilionoideae common tetraploidy | Trifolium pratense | 802 |
Papilionoideae common tetraploidy | Trifolium subterranum | 887 |
Papilionoideae common tetraploidy | Vigna radiata | 611 |
Soybean specific tetraploidy | Glycine max | 5,948 |
Soybean specific tetraploidy | Glycine soja | 5,231 |
hybrid gene pairs | Arachis hypogaea | 7,020 |
hybrid gene pairs | Arachis monticola | 1,248 |
Bva_WGD | Bauhinia variegata | 123 |
Eudicot Common Hexaploidization | Arachis duranensis | 259 |
Eudicot Common Hexaploidization | Amphicarpaea edgeworthii | 364 |
Eudicot Common Hexaploidization | Aeschynomene evenia | 203 |
Eudicot Common Hexaploidization | Arachis hypogaea | 6236 |
Eudicot Common Hexaploidization | Arachis ipaensis | 313 |
Eudicot Common Hexaploidization | Arachis monticola | 1275 |
Eudicot Common Hexaploidization | Abrus precatorius | 569 |
Eudicot Common Hexaploidization | Bauhinia variegata | 2105 |
Eudicot Common Hexaploidization | Cicer arietinum | 253 |
Eudicot Common Hexaploidization | Cajanus cajan | 541 |
Eudicot Common Hexaploidization | Dalbergia odorifera | 271 |
Eudicot Common Hexaploidization | Glycine max | 7828 |
Eudicot Common Hexaploidization | Glycine soja | 7117 |
Eudicot Common Hexaploidization | Lupinus albus | 5179 |
Eudicot Common Hexaploidization | Lupinus angustifolius | 3176 |
Eudicot Common Hexaploidization | Lotus japonicus | 429 |
Eudicot Common Hexaploidization | Melilotus albus | 271 |
Eudicot Common Hexaploidization | Medicago truncatula | 336 |
Eudicot Common Hexaploidization | Pisum sativum | 120 |
Eudicot Common Hexaploidization | Phaseolus vulgaris | 287 |
Eudicot Common Hexaploidization | Vicia faba | 368 |
Eudicot Common Hexaploidization | Spatholobus suberectus | 417 |
Eudicot Common Hexaploidization | Senna tora | 555 |
Eudicot Common Hexaploidization | Trifolium pratense | 646 |
Eudicot Common Hexaploidization | Trifolium subterranum | 275 |
Eudicot Common Hexaploidization | Vigna radiata | 177 |
Reference | Number of rows | Number of columns |
---|---|---|
Phaseolus vulgaris | 27,996 | 62 |
Vitis vinifera | 28,164 | 189 |
Genome | Number of genes | Number of structural domains |
---|---|---|
Arachis_duranensis | 42,921 | 4,099 |
Amphicarpaea_edgeworthii | 35,422 | 4,052 |
Aeschynomene_evenia | 36,627 | 4,123 |
Arachis_hypogaea | 92,171 | 4,151 |
Arachis_ipaensis | 46,889 | 4,100 |
Arachis_monticola | 66,393 | 4,063 |
Abrus_precatorius | 36,966 | 4,119 |
Bauhinia_variegata | 48,879 | 4,160 |
Cicer_arietinum | 33,352 | 4,111 |
Cajanus_cajan | 37,938 | 4,042 |
Dalbergia_odorifera | 35,460 | 4,053 |
Glycine_max | 70,061 | 4,119 |
Glycine_soja | 65,800 | 4,141 |
Lupinus_albus | 46,468 | 4,094 |
Lupinus_angustifolius | 43,542 | 3,993 |
Lotus_japonicus | 36,669 | 4,063 |
Melilotus_albus | 50,158 | 4,135 |
Medicago_truncatula | 47,125 | 4,162 |
Pisum_sativum | 35,686 | 4,021 |
Phaseolus_vulgaris | 37,573 | 4,118 |
Spatholobus_suberectus | 35,671 | 4,038 |
Senna_tora | 40,085 | 4,025 |
Trifolium_pratense | 48,418 | 4,124 |
Trifolium_subterranum | 51,203 | 4,088 |
Vigna_radiata | 32,632 | 3,887 |
Vitis_vinifera | 34,670 | 4,030 |
Genome | WGD | TD | PD | TRD | DSD |
---|---|---|---|---|---|
Arachis duranensis | 4,865 | 2,037 | 1,525 | 9,965 | 26,002 |
Amphicarpaea edgeworthii | 6,394 | 2,383 | 1,055 | 6,052 | 18,877 |
Aeschynomene evenia | 6,654 | 1,752 | 807 | 9,678 | 22,370 |
Arachis hypogaea | 38,758 | 4,207 | 3,057 | 11,225 | 55,186 |
Arachis ipaensis | 4,571 | 2,330 | 2,080 | 11,304 | 31,335 |
Arachis monticola | 11,324 | 2,483 | 3,563 | 24,791 | 59,365 |
Abrus precatorius | 7,550 | 1,818 | 552 | 5,703 | 17,421 |
Cicer arietinum | 4,688 | 1,717 | 780 | 6,599 | 17,327 |
Cajanus cajan | 6,912 | 2,325 | 1,356 | 6,874 | 20,353 |
Dalbergia odorifera | 7,470 | 1,860 | 1,111 | 6,696 | 19,260 |
Glycine max | 39,585 | 2,540 | 1,280 | 10,184 | 40,400 |
Glycine soja | 36,585 | 2,813 | 1,126 | 7,063 | 36,554 |
Lupinus albus | 19,306 | 1,443 | 1,222 | 11,078 | 31,574 |
Lupinus angustifolius | 13,846 | 1,434 | 485 | 7,361 | 22,647 |
Lotus japonicus | 4,956 | 1,951 | 809 | 6,572 | 18,716 |
Melilotus albus | 4,212 | 4,026 | 2,792 | 8,061 | 33,061 |
Medicago truncatula | 4,704 | 4,249 | 1,590 | 7,119 | 24,747 |
Pisum sativum | 1,059 | 2,452 | 1,547 | 5,394 | 27,297 |
Phaseolus vulgaris | 5,682 | 2,606 | 1,112 | 6,405 | 19,713 |
Spatholobus suberectus | 7,760 | 2,101 | 1,400 | 6,537 | 19,749 |
Trifolium pratense | 5,903 | 3,737 | 1,614 | 8,932 | 26,100 |
Trifolium subterranum | 4,217 | 2,914 | 1,918 | 9,683 | 29,777 |
Vigna radiata | 4,160 | 1,860 | 617 | 5,781 | 16,002 |
Senna tora | 9,777 | 2,162 | 2,343 | 9,743 | 29,250 |
Bauhinia variegata | 21,275 | 2,353 | 4,187 | 2,828 | 7,243 |
Vitis vinifera | 2,715 | 2,964 | 1,941 | 5,590 | 18,636 |
Species | Number of genes | Number of genes in orthogroups | Number of unassigned genes | Percentage of genes in orthogroups | Percentage of unassigned genes | Number of orthogroups containing species | Percentage of orthogroups containing species | Number of species-specific orthogroups | Number of genes in species-specific orthogroups | Percentage of genes in species-specific orthogroups |
Arachis duranensis | 33,238 | 32,159 | 1,079 | 96.8 | 3.2 | 18,719 | 45.7 | 95 | 239 | 0.7 |
Amphicarpaea edgeworthii | 27,699 | 26,227 | 1,472 | 94.7 | 5.3 | 15,880 | 38.7 | 160 | 413 | 1.5 |
Aeschynomene evenia | 30,827 | 28,822 | 2,005 | 93.5 | 6.5 | 15,549 | 37.9 | 508 | 4,135 | 13.4 |
Arachis hypogaea | 65,593 | 64,612 | 981 | 98.5 | 1.5 | 19,101 | 46.6 | 263 | 1,874 | 2.9 |
Arachis ipaensis | 38,608 | 37,206 | 1,402 | 96.4 | 3.6 | 19,988 | 48.8 | 171 | 445 | 1.2 |
Arachis monticola | 69,883 | 67,087 | 2,796 | 96 | 4 | 22,552 | 55 | 2,010 | 8,837 | 12.6 |
Abrus precatorius | 24,427 | 24,318 | 109 | 99.6 | 0.4 | 14,869 | 36.3 | 24 | 194 | 0.8 |
Bauhinia variegata | 37,886 | 35,458 | 2,428 | 93.6 | 6.4 | 16,652 | 40.6 | 401 | 1,734 | 4.6 |
Cicer arietinum | 24,711 | 23,805 | 906 | 96.3 | 3.7 | 15,414 | 37.6 | 168 | 607 | 2.5 |
Cajanus cajan | 28,222 | 27,008 | 1,214 | 95.7 | 4.3 | 16,023 | 39.1 | 221 | 652 | 2.3 |
Dalbergia odorifera | 29,344 | 26,738 | 2,606 | 91.1 | 8.9 | 16,364 | 39.9 | 264 | 669 | 2.3 |
Glycine max | 51,824 | 48,008 | 3,816 | 92.6 | 7.4 | 18,656 | 45.5 | 485 | 1,306 | 2.5 |
Glycine soja | 46,722 | 46,225 | 497 | 98.9 | 1.1 | 16,703 | 40.7 | 46 | 166 | 0.4 |
Lupinus albus | 41,277 | 39,246 | 2,031 | 95.1 | 4.9 | 15,730 | 38.4 | 341 | 3,349 | 8.1 |
Lupinus angustifolius | 29,986 | 29,728 | 258 | 99.1 | 0.9 | 14,306 | 34.9 | 32 | 80 | 0.3 |
Lotus japonicus | 26,152 | 25,142 | 1,010 | 96.1 | 3.9 | 15,110 | 36.9 | 260 | 979 | 3.7 |
Melilotus albus | 41,853 | 39,902 | 1,951 | 95.3 | 4.7 | 17,386 | 42.4 | 686 | 3,067 | 7.3 |
Medicago truncatula | 31,727 | 31,271 | 456 | 98.6 | 1.4 | 15,855 | 38.7 | 136 | 536 | 1.7 |
Pisum sativum | 38,312 | 33,691 | 4,621 | 87.9 | 12.1 | 16,295 | 39.7 | 1,081 | 6,873 | 17.9 |
Phaseolus vulgaris | 27,996 | 27,014 | 982 | 96.5 | 3.5 | 15,863 | 38.7 | 67 | 238 | 0.9 |
Spatholobus suberectus | 29,597 | 27,169 | 2,428 | 91.8 | 8.2 | 16,250 | 39.6 | 225 | 596 | 2 |
Senna tora | 44,405 | 36,133 | 8,272 | 81.4 | 18.6 | 16,166 | 39.4 | 1,342 | 9,303 | 21 |
Trifolium pratense | 33,414 | 32,962 | 452 | 98.6 | 1.4 | 15,789 | 38.5 | 216 | 970 | 2.9 |
Trifolium subterranum | 36,691 | 35,408 | 1,283 | 96.5 | 3.5 | 16,403 | 40 | 217 | 1,031 | 2.8 |
Vigna radiata | 22,158 | 21,895 | 263 | 98.8 | 1.2 | 13,436 | 32.8 | 56 | 309 | 1.4 |
Vitis vinifera | 28,164 | 24,338 | 3,826 | 86.4 | 13.6 | 14,929 | 36.4 | 616 | 2,203 | 7.8 |
Genome | Number of gene famly |
---|---|
Arachis duranensis | 18,203 |
Amphicarpaea edgeworthii | 15,469 |
Aeschynomene evenia | 15,185 |
Arachis hypogaea | 18,202 |
Arachis ipaensis | 19,455 |
Arachis monticola | 21,476 |
Abrus precatorius | 14,533 |
Bauhinia variegata | 16,085 |
Cicer arietinum | 15,027 |
Cajanus cajan | 15,577 |
Dalbergia odorifera | 15,796 |
Glycine max | 18088 |
Glycine soja | 16,269 |
Lupinus albus | 15,213 |
Lupinus angustifolius | 13,895 |
Lotus japonicus | 14,716 |
Melilotus albus | 16,671 |
Medicago truncatula | 15,299 |
Pisum sativum | 15,775 |
Phaseolus vulgaris | 15,404 |
Spatholobus suberectus | 15737 |
Senna tora | 15,732 |
Trifolium pratense | 15,252 |
Trifolium subterranum | 15,606 |
Vigna radiata | 13,137 |
Vitis vinifera | 14,506 |
Order | Number |
Number of species | 26 |
Number of genes | 940,716 |
Number of genes in orthogroups | 89,4037 |
Number of unassigned genes | 46,679 |
Percentage of genes in orthogroups | 95.0 |
Percentage of unassigned genes | 5.0 |
Number of orthogroups | 38,690 |
Number of species-specific orthogroups | 10,088 |
Number of genes in species-specific orthogroups | 48,016 |
Percentage of genes in species-specific orthogroups | 5.1 |
Mean orthogroup size | 23.1 |
Median orthogroup size | 7.0 |
G50 (assigned genes) | 48 |
G50 (all genes) | 45 |
O50 (assigned genes) | 4,998 |
O50 (all genes) | 5,500 |
Number of orthogroups with all species present | 6,669 |
Number of single-copy orthogroups | 2 |
Species | Number |
Arachis duranensis | 7,466 |
Amphicarpaea edgeworthii | 1,672 |
Aeschynomene evenia | 1,969 |
Arachis hypogaea | 12,617 |
Arachis ipaensis | 4,044 |
Arachis monticola | 6,076 |
Abrus precatorius | 6,693 |
Bauhinia variegata | 7,336 |
Cicer arietinum | 1,401 |
Cajanus cajan | 2,597 |
Dalbergia odorifera | 2,845 |
Glycine max | 5,828 |
Glycine soja | 5,112 |
Lupinus albus | 5,438 |
Lupinus angustifolius | 4,204 |
Lotus japonicus | 5,747 |
Melilotus albus | 4,574 |
Medicago truncatula | 12,002 |
Pisum sativum | 780 |
Phaseolus vulgaris | 2,078 |
Spatholobus suberectus | 2,766 |
Senna tora | 1,096 |
Trifolium pratense | 7,586 |
Trifolium subterranum | 1,894 |
Vigna radiata | 1,511 |
order | ClassI | ClassII | ClassIII_Helitron | ClassII_DNA_CACTA_MITE | ClassII_DNA_CACTA_nMITE | ClassII_DNA_CACTA_unknown | ClassII_DNA_Harbinger_MITE | ClassII_DNA_Harbinger_nMITE | ClassII_DNA_Harbinger_unknown | ClassII_DNA_hAT_MITE | ClassII_DNA_hAT_nMITE | ClassII_DNA_hAT_unknown | ClassII_DNA_Mutator_MITE | ClassII_DNA_Mutator_nMITE | ClassII_DNA_Mutator_unknown | ClassII_DNA_P_nMITE | ClassII_DNA_TcMar_MITE | ClassII_DNA_TcMar_nMITE | ClassII_DNA_TcMar_unknown | ClassII_MITE | ClassII_nMITE | ClassI_LTR | ClassI_LTR_Copia | ClassI_LTR_Gypsy | ClassI_nLTR | ClassI_nLTR_DIRS | ClassI_nLTR_LINE_I | ClassI_nLTR_LINE_L1 | ClassI_nLTR_PLE | ClassI_nLTR_SINE_tRNA | Low_complexity | Satellite | Simple_repeat | unknown | Total |
Arachis duranensis | 29,571 | 3,193 | 8,990 | 2,628 | 11,170 | 0 | 13,691 | 13,106 | 0 | 80,902 | 77,361 | 3,734 | 24,285 | 106,807 | 1,707 | 0 | 17,744 | 25,374 | 841 | 29,476 | 66,104 | 3,546 | 43,994 | 535,537 | 0 | 0 | 22,844 | 0 | 4,393 | 2,479 | 43,757 | 0 | 175,149 | 55,214 | 1,403,597 |
Amphicarpaea edgeworthii | 4,829 | 635 | 1,526 | 1,351 | 7,205 | 0 | 15,042 | 4,281 | 175 | 33,611 | 52,356 | 1,244 | 32,424 | 23,094 | 0 | 233 | 17,391 | 3,126 | 0 | 27,936 | 33,084 | 2,160 | 38,462 | 43,580 | 104 | 623 | 286 | 4,608 | 749 | 794 | 22,301 | 0 | 105,110 | 15,015 | 493,335 |
Aeschynomene evenia | 5,250 | 0 | 26,003 | 1,597 | 35,413 | 0 | 10,685 | 12,892 | 0 | 43,070 | 38,733 | 390 | 31,642 | 32,646 | 545 | 0 | 29,857 | 5,333 | 2,564 | 32,200 | 44,396 | 5,779 | 27,282 | 69,076 | 103 | 39 | 62 | 2,816 | 933 | 897 | 18,191 | 0 | 112,538 | 25,846 | 616,778 |
Arachis hypogaea | 70,338 | 10,407 | 22,157 | 6,342 | 26,529 | 0 | 32,461 | 30,823 | 0 | 187,714 | 186,879 | 8,283 | 57,637 | 257,307 | 3,694 | 0 | 43,276 | 62,848 | 2,393 | 71,051 | 163,856 | 8,442 | 99,719 | 1,147,927 | 0 | 0 | 0 | 52,305 | 9,074 | 7,742 | 98,816 | 0 | 478,235 | 147,673 | 3,293,928 |
Arachis ipaensis | 41,943 | 5,878 | 11,108 | 3,206 | 14,837 | 0 | 15,631 | 14,887 | 0 | 82,013 | 93,534 | 3,993 | 27,847 | 128,553 | 1,734 | 0 | 20,939 | 34,257 | 1,445 | 33,360 | 82,236 | 4,627 | 54,844 | 692,004 | 0 | 0 | 0 | 29,545 | 4,489 | 4,821 | 45,511 | 0 | 191,719 | 80,295 | 1,725,256 |
Arachis monticola | 63,545 | 9,768 | 21,336 | 6,073 | 26,032 | 0 | 31,070 | 29,559 | 0 | 178,124 | 180,575 | 7,962 | 53,478 | 248,186 | 3,626 | 0 | 41,002 | 58,497 | 2,326 | 66,018 | 155,852 | 8,216 | 97,030 | 1,122,688 | 0 | 0 | 0 | 50,210 | 8,959 | 7,464 | 107,984 | 0 | 512,099 | 139,548 | 3,237,227 |
Abrus precatorius | 2,150 | 285 | 1,671 | 394 | 4,503 | 0 | 9,144 | 3,475 | 0 | 44,674 | 33,996 | 420 | 16,955 | 10,501 | 0 | 0 | 29,249 | 5,703 | 1,066 | 31,764 | 20,533 | 3,720 | 11,014 | 62,825 | 121 | 1,069 | 2,516 | 5,943 | 1,038 | 606 | 28,382 | 0 | 112,663 | 21,896 | 468,276 |
Bauhinia variegata | 5,155 | 259 | 389 | 0 | 5,153 | 0 | 6,699 | 3,682 | 0 | 27,083 | 29,567 | 328 | 8,314 | 10,479 | 0 | 521 | 19,034 | 5,094 | 33 | 26,153 | 26,626 | 3,993 | 12,994 | 38,425 | 433 | 0 | 99 | 6,326 | 2,745 | 529 | 21,523 | 0 | 107,226 | 23,090 | 391,952 |
Cicer arietinum | 9,317 | 736 | 9,933 | 7,007 | 7,119 | 1,187 | 23,362 | 6,615 | 912 | 132,608 | 114,207 | 3,849 | 41,912 | 49,354 | 974 | 0 | 46,085 | 14,136 | 0 | 62,797 | 49,984 | 12,273 | 62,737 | 227,135 | 728 | 403 | 3,826 | 6,180 | 5,588 | 1,761 | 33,604 | 0 | 172,082 | 73,272 | 1,181,683 |
Cajanus cajan | 3,137 | 390 | 10,194 | 4,027 | 17,494 | 0 | 10,892 | 10,019 | 0 | 94,532 | 102,184 | 1,224 | 48,708 | 67,438 | 154 | 0 | 44,837 | 31,938 | 0 | 45,097 | 67,150 | 5,251 | 66,966 | 75,606 | 1,672 | 70 | 0 | 3,667 | 3,831 | 1,897 | 26,097 | 1 | 124,990 | 60,546 | 930,009 |
Dalbergia odorifera | 7,470 | 702 | 12,128 | 1,892 | 36,497 | 0 | 29,115 | 11,394 | 0 | 91,658 | 83,352 | 5,173 | 46,186 | 60,513 | 183 | 0 | 63,447 | 20,001 | 0 | 62,612 | 73,271 | 7,961 | 44,900 | 178,453 | 1,481 | 308 | 1,227 | 8,465 | 13,217 | 4,652 | 29,973 | 0 | 164,775 | 72,552 | 1,133,558 |
Glycine max | 11,312 | 0 | 5,984 | 2,958 | 21,310 | 0 | 30,085 | 17,116 | 0 | 92,336 | 49,909 | 2,687 | 53,306 | 57,936 | 0 | 396 | 69,290 | 28,131 | 472 | 66,060 | 53,659 | 6,942 | 88,432 | 227,675 | 0 | 2,772 | 163 | 12,301 | 6,488 | 1,783 | 53,507 | 0 | 245,161 | 68,053 | 1,276,224 |
Glycine soja | 11,501 | 0 | 6,121 | 3,013 | 21,785 | 0 | 30,303 | 17,660 | 0 | 93,491 | 50,201 | 2,709 | 54,073 | 59,259 | 0 | 394 | 70,195 | 29,727 | 482 | 69,650 | 54,835 | 7,083 | 89,867 | 235,814 | 0 | 2,854 | 168 | 12,478 | 6,558 | 1,823 | 54,159 | 0 | 248,119 | 70,882 | 1,305,204 |
Lupinus albus | 6,770 | 0 | 20,962 | 545 | 5,053 | 0 | 12,116 | 13,717 | 177 | 68,911 | 64,263 | 4,484 | 31,379 | 52,379 | 465 | 0 | 58,107 | 20,645 | 0 | 43,179 | 45,198 | 4,098 | 54,199 | 169,618 | 0 | 0 | 0 | 5,023 | 430 | 4,844 | 16,853 | 0 | 91,240 | 72,993 | 867,648 |
Lupinus angustifolius | 8,040 | 0 | 12,322 | 703 | 9,283 | 0 | 16,952 | 7,592 | 189 | 82,770 | 103,835 | 8,822 | 38,011 | 31,575 | 1,082 | 0 | 70,889 | 22,011 | 0 | 53,035 | 92,927 | 6,346 | 96,997 | 193,235 | 0 | 0 | 0 | 10,570 | 489 | 6,270 | 26,953 | 0 | 126,500 | 80,733 | 1,108,131 |
Lotus japonicus | 1,566 | 0 | 1,946 | 1,124 | 4,426 | 0 | 8,403 | 5,083 | 0 | 46,066 | 31,156 | 78 | 11,491 | 14,873 | 264 | 191 | 33,036 | 4,525 | 0 | 24,594 | 27,113 | 1,935 | 13,731 | 62,507 | 0 | 0 | 192 | 7,769 | 1,130 | 584 | 28,219 | 0 | 112,706 | 26,525 | 471,233 |
Melilotus albus | 9,942 | 889 | 6,834 | 2,595 | 19,365 | 0 | 48,296 | 24,240 | 5,402 | 112,227 | 195,303 | 2,126 | 106,263 | 76,317 | 5,924 | 0 | 90,336 | 35,592 | 4,590 | 82,519 | 92,229 | 18,177 | 188,724 | 364,056 | 352 | 0 | 194 | 56,058 | 11,488 | 6,028 | 67,386 | 0 | 331,209 | 117,672 | 2,082,333 |
Medicago truncatula | 6,600 | 808 | 6,471 | 2,064 | 13,185 | 0 | 24,311 | 14,135 | 4,170 | 74,603 | 65,385 | 1,552 | 73,241 | 48,484 | 4,003 | 0 | 65,575 | 22,731 | 640 | 44,435 | 56,584 | 6,978 | 43,588 | 102,095 | 357 | 0 | 139 | 12,917 | 4,344 | 3,705 | 21,023 | 0 | 104,130 | 66,929 | 895,182 |
Pisum sativum | 24,913 | 1,803 | 7,745 | 3,714 | 102,876 | 0 | 34,498 | 170,844 | 6,588 | 87,741 | 129,588 | 3,398 | 22,355 | 141,508 | 0 | 8,562 | 25,048 | 135,071 | 1,051 | 42,853 | 180,498 | 65,525 | 362,024 | 1,586,265 | 4,624 | 36,355 | 3,158 | 28,583 | 42,212 | 6,931 | 52,949 | 1 | 313,620 | 226,837 | 3,859,738 |
Phaseolus vulgaris | 4,816 | 0 | 1,723 | 970 | 11,515 | 0 | 6,504 | 10,978 | 215 | 47,800 | 53,587 | 1,151 | 16,415 | 19,854 | 1,128 | 0 | 19,812 | 18,341 | 973 | 33,882 | 33,731 | 6,030 | 58,627 | 141,065 | 1,382 | 0 | 0 | 23,767 | 2,504 | 1,084 | 27,412 | 0 | 111,424 | 52,002 | 708,692 |
Spatholobus suberectus | 15,830 | 691 | 23,990 | 2,135 | 64,478 | 0 | 27,131 | 17,932 | 400 | 120,859 | 214,321 | 5,438 | 57,374 | 182,100 | 895 | 308 | 40,487 | 30,489 | 602 | 101,884 | 174,019 | 7,445 | 68,440 | 175,229 | 672 | 0 | 0 | 13,714 | 17,893 | 2,357 | 43,653 | 0 | 215,737 | 106,086 | 1,732,589 |
Senna tora | 8,191 | 905 | 18,241 | 1,051 | 22,141 | 0 | 19,393 | 16,378 | 0 | 72,907 | 72,570 | 1,959 | 79,237 | 94,483 | 6,610 | 0 | 20,974 | 11,104 | 0 | 32,012 | 46,894 | 5,264 | 23,947 | 141,668 | 166 | 0 | 365 | 18,570 | 3,174 | 4,494 | 22,171 | 0 | 152,535 | 52,555 | 949,959 |
Trifolium pratense | 6,634 | 103 | 15,595 | 5,131 | 5,495 | 0 | 33,327 | 4,839 | 0 | 121,656 | 54,362 | 3,070 | 66,746 | 50,846 | 1,024 | 0 | 69,397 | 25,146 | 94 | 54,662 | 50,552 | 4,160 | 50,442 | 103,867 | 160 | 86 | 0 | 11,721 | 1,746 | 9,943 | 25,043 | 0 | 130,593 | 61,965 | 968,405 |
Trifolium subterranum | 7,329 | 91 | 14,755 | 6,269 | 5,273 | 0 | 32,631 | 5,489 | 0 | 124,845 | 59,790 | 2,311 | 63,799 | 50,459 | 1,352 | 0 | 77,721 | 26,623 | 88 | 58,565 | 51,266 | 4,815 | 79,453 | 90,165 | 321 | 116 | 0 | 16,434 | 2,648 | 8,639 | 20,209 | 0 | 95,548 | 57,191 | 964,195 |
Vigna radiata | 6,982 | 1,030 | 2,329 | 1,662 | 12,751 | 0 | 6,817 | 9,258 | 26 | 43,307 | 67,589 | 1,410 | 29,984 | 53,138 | 256 | 245 | 13,452 | 23,473 | 0 | 25,274 | 33,992 | 2,507 | 54,057 | 121,759 | 621 | 4,442 | 0 | 3,777 | 4,670 | 1,290 | 30,307 | 0 | 133,300 | 61,071 | 750,776 |
Total | 373,131 | 38,573 | 270,453 | 68,451 | 510,888 | 1,187 | 528,559 | 475,994 | 18,254 | 2,185,508 | 2,204,603 | 77,795 | 1,093,062 | 1,928,089 | 35,620 | 10,850 | 1,097,180 | 699,916 | 19,660 | 1,221,068 | 1,776,589 | 213,273 | 1,832,470 | 7,908,274 | 13,297 | 49,137 | 35,239 | 403,747 | 160,790 | 93,417 | 965,983 | 2 | 4,668,408 | 1,836,441 | 32,815,908 |
Species | AP2 | ARF | ARR-B | B3 | BBR-BPC | BES1 | bHLH | bZIP | C2H2 | C3H | CAMTA | CO-like | CPP | DBB | Dof | E2F/DP | EIL | ERF | FAR1 | G2-like | GATA | GeBP | GRAS | GRF | HB-other | HB-PHD | HD-ZIP | HRT-like | HSF | LBD | LFY | LSD | MIKC_MADS | M-type_MADS | MYB | MYB_related | NAC | NF-X1 | NF-YA | NF-YB | NF-YC | Nin-like | NZZ/SPL | RAV | S1Fa-like | SAP | SBP | SRS | STAT | TALE | TCP | Trihelix | VOZ | Whirly | WOX | WRKY | YABBY | ZF-HD |
Species | AP2 | ARF | ARR-B | B3 | BBR-BPC | BES1 | bHLH | bZIP | C2H2 | C3H | CAMTA | CO-like | CPP | DBB | Dof | E2F/DP | EIL | ERF | FAR1 | G2-like | GATA | GeBP | GRAS | GRF | HB-other | HB-PHD | HD-ZIP | HRT-like | HSF | LBD | LFY | LSD | MIKC_MADS | M-type_MADS | MYB | MYB_related | NAC | NF-X1 | NF-YA | NF-YB | NF-YC | Nin-like | NZZ/SPL | RAV | S1Fa-like | SAP | SBP | SRS | STAT | TALE | TCP | Trihelix | VOZ | Whirly | WOX | WRKY | YABBY | ZF-HD |
Arachis duranensis | 25 | 30 | 12 | 75 | 5 | 10 | 178 | 73 | 113 | 47 | 11 | 10 | 12 | 10 | 38 | 9 | 10 | 139 | 251 | 53 | 26 | 9 | 61 | 8 | 13 | 2 | 44 | 1 | 25 | 52 | 2 | 4 | 38 | 28 | 139 | 99 | 85 | 2 | 10 | 15 | 13 | 15 | 1 | 3 | 2 | 1 | 18 | 18 | 1 | 28 | 31 | 39 | 2 | 4 | 14 | 91 | 8 | 18 |
Amphicarpaea edgeworthii | 23 | 12 | 10 | 39 | 6 | 7 | 155 | 79 | 123 | 44 | 6 | 13 | 7 | 10 | 37 | 7 | 8 | 138 | 40 | 47 | 33 | 4 | 54 | 8 | 10 | 2 | 50 | 1 | 1 | 57 | 2 | 5 | 28 | 22 | 147 | 110 | 40 | 3 | 11 | 18 | 12 | 11 | 0 | 3 | 2 | 1 | 25 | 9 | 1 | 21 | 17 | 38 | 3 | 3 | 16 | 95 | 9 | 11 |
Aeschynomene evenia | 23 | 29 | 11 | 47 | 5 | 7 | 162 | 71 | 108 | 39 | 8 | 12 | 8 | 9 | 34 | 9 | 7 | 133 | 103 | 45 | 33 | 4 | 51 | 10 | 8 | 3 | 48 | 1 | 26 | 48 | 2 | 3 | 40 | 36 | 124 | 87 | 79 | 2 | 7 | 25 | 13 | 12 | 2 | 2 | 3 | 1 | 20 | 10 | 0 | 25 | 28 | 39 | 2 | 3 | 17 | 88 | 8 | 22 |
Arachis hypogaea | 49 | 56 | 23 | 129 | 10 | 16 | 337 | 153 | 211 | 79 | 13 | 24 | 19 | 14 | 77 | 18 | 13 | 281 | 573 | 93 | 50 | 12 | 102 | 19 | 21 | 6 | 87 | 0 | 45 | 108 | 4 | 8 | 82 | 53 | 292 | 139 | 164 | 4 | 16 | 31 | 26 | 31 | 3 | 5 | 4 | 2 | 37 | 24 | 2 | 57 | 50 | 74 | 4 | 5 | 30 | 172 | 17 | 34 |
Arachis ipaensis | 30 | 32 | 11 | 64 | 6 | 10 | 185 | 82 | 110 | 51 | 13 | 10 | 17 | 8 | 40 | 10 | 8 | 150 | 443 | 60 | 25 | 4 | 52 | 9 | 12 | 3 | 44 | 1 | 22 | 53 | 2 | 4 | 39 | 39 | 132 | 89 | 87 | 2 | 10 | 16 | 13 | 21 | 0 | 3 | 2 | 1 | 19 | 15 | 1 | 26 | 38 | 38 | 2 | 4 | 15 | 92 | 8 | 20 |
Arachis monticola | 33 | 33 | 15 | 91 | 5 | 16 | 239 | 113 | 135 | 69 | 15 | 20 | 13 | 8 | 51 | 13 | 12 | 131 | 631 | 72 | 33 | 9 | 70 | 12 | 17 | 3 | 69 | 1 | 30 | 76 | 4 | 7 | 59 | 37 | 199 | 123 | 129 | 5 | 15 | 21 | 21 | 28 | 2 | 6 | 2 | 1 | 28 | 19 | 2 | 39 | 31 | 50 | 4 | 7 | 16 | 140 | 15 | 14 |
Abrus precatorius | 26 | 31 | 18 | 27 | 4 | 6 | 186 | 76 | 117 | 48 | 8 | 13 | 6 | 8 | 41 | 6 | 6 | 155 | 32 | 49 | 30 | 4 | 51 | 9 | 8 | 3 | 55 | 1 | 29 | 55 | 2 | 4 | 48 | 20 | 172 | 60 | 90 | 3 | 9 | 21 | 13 | 13 | 0 | 3 | 2 | 1 | 24 | 9 | 1 | 32 | 29 | 40 | 3 | 3 | 18 | 96 | 8 | 18 |
Bauhinia variegata | 27 | 33 | 14 | 52 | 8 | 11 | 206 | 99 | 138 | 59 | 8 | 21 | 7 | 10 | 45 | 11 | 7 | 185 | 47 | 63 | 44 | 12 | 80 | 14 | 10 | 4 | 59 | 2 | 33 | 58 | 2 | 5 | 50 | 45 | 211 | 85 | 127 | 2 | 13 | 26 | 17 | 14 | 2 | 4 | 2 | 2 | 30 | 10 | 2 | 38 | 37 | 55 | 3 | 3 | 24 | 103 | 12 | 22 |
Cicer arietinum | 24 | 27 | 13 | 38 | 3 | 5 | 142 | 70 | 114 | 41 | 7 | 9 | 5 | 8 | 37 | 5 | 6 | 131 | 23 | 45 | 29 | 13 | 47 | 8 | 10 | 2 | 51 | 2 | 19 | 51 | 1 | 4 | 38 | 43 | 130 | 56 | 81 | 3 | 8 | 22 | 12 | 10 | 1 | 3 | 2 | 1 | 20 | 8 | 1 | 22 | 23 | 36 | 2 | 3 | 17 | 78 | 9 | 20 |
Cajanus cajan | 25 | 29 | 15 | 42 | 5 | 5 | 185 | 76 | 127 | 45 | 10 | 10 | 6 | 9 | 42 | 7 | 6 | 157 | 30 | 53 | 31 | 9 | 71 | 10 | 7 | 2 | 54 | 1 | 26 | 56 | 1 | 5 | 39 | 38 | 173 | 96 | 91 | 3 | 13 | 23 | 16 | 15 | 0 | 3 | 3 | 1 | 24 | 10 | 1 | 33 | 26 | 41 | 3 | 3 | 18 | 95 | 9 | 20 |
Dalbergia odorifera | 22 | 27 | 13 | 43 | 6 | 6 | 183 | 77 | 124 | 42 | 8 | 13 | 6 | 9 | 39 | 9 | 7 | 148 | 6 | 46 | 32 | 4 | 61 | 10 | 9 | 3 | 51 | 1 | 26 | 54 | 2 | 5 | 38 | 23 | 149 | 66 | 97 | 3 | 9 | 21 | 13 | 12 | 0 | 3 | 3 | 1 | 22 | 9 | 1 | 28 | 26 | 41 | 2 | 3 | 17 | 100 | 8 | 19 |
Glycine max | 50 | 57 | 35 | 68 | 11 | 17 | 349 | 146 | 241 | 84 | 15 | 23 | 12 | 17 | 78 | 15 | 14 | 295 | 66 | 103 | 63 | 14 | 134 | 18 | 20 | 6 | 104 | 1 | 56 | 91 | 4 | 8 | 89 | 58 | 307 | 167 | 183 | 5 | 22 | 41 | 26 | 28 | 0 | 5 | 4 | 2 | 47 | 22 | 1 | 64 | 63 | 76 | 7 | 7 | 33 | 182 | 16 | 39 |
Glycine soja | 49 | 57 | 29 | 57 | 10 | 15 | 341 | 147 | 229 | 77 | 14 | 23 | 10 | 18 | 78 | 14 | 11 | 294 | 75 | 100 | 63 | 11 | 102 | 22 | 15 | 6 | 101 | 1 | 50 | 85 | 2 | 8 | 87 | 66 | 321 | 138 | 171 | 5 | 20 | 32 | 24 | 27 | 0 | 5 | 4 | 2 | 43 | 21 | 1 | 63 | 59 | 75 | 7 | 7 | 32 | 174 | 16 | 49 |
Lupinus albus | 35 | 39 | 19 | 45 | 11 | 12 | 220 | 121 | 168 | 64 | 7 | 20 | 9 | 14 | 62 | 13 | 11 | 180 | 163 | 81 | 44 | 9 | 48 | 16 | 15 | 2 | 73 | 1 | 33 | 72 | 3 | 10 | 54 | 75 | 206 | 85 | 123 | 2 | 15 | 23 | 15 | 15 | 2 | 6 | 6 | 1 | 34 | 12 | 1 | 37 | 37 | 60 | 4 | 4 | 30 | 106 | 14 | 37 |
Lupinus angustifolius | 32 | 40 | 16 | 43 | 10 | 10 | 219 | 121 | 152 | 68 | 8 | 17 | 11 | 15 | 60 | 12 | 11 | 171 | 29 | 73 | 39 | 10 | 52 | 15 | 15 | 3 | 64 | 1 | 28 | 70 | 3 | 8 | 50 | 51 | 207 | 75 | 115 | 2 | 10 | 24 | 15 | 16 | 2 | 5 | 3 | 1 | 32 | 10 | 1 | 42 | 42 | 59 | 4 | 3 | 26 | 97 | 14 | 18 |
Lotus japonicus | 24 | 26 | 21 | 49 | 4 | 5 | 161 | 72 | 102 | 43 | 8 | 11 | 6 | 8 | 36 | 8 | 7 | 125 | 80 | 38 | 24 | 7 | 56 | 8 | 10 | 3 | 50 | 1 | 21 | 44 | 1 | 5 | 36 | 53 | 144 | 72 | 81 | 3 | 8 | 17 | 11 | 14 | 0 | 3 | 3 | 0 | 20 | 9 | 1 | 23 | 26 | 34 | 2 | 3 | 15 | 80 | 7 | 17 |
Melilotus albus | 27 | 38 | 31 | 91 | 4 | 7 | 158 | 81 | 155 | 51 | 7 | 9 | 8 | 7 | 36 | 6 | 7 | 161 | 272 | 43 | 40 | 9 | 55 | 8 | 12 | 2 | 51 | 3 | 25 | 63 | 1 | 4 | 42 | 121 | 160 | 86 | 104 | 3 | 8 | 25 | 15 | 14 | 0 | 3 | 2 | 1 | 21 | 9 | 1 | 24 | 23 | 38 | 2 | 4 | 17 | 99 | 10 | 18 |
Medicago truncatula | 24 | 36 | 26 | 73 | 4 | 7 | 167 | 72 | 117 | 48 | 8 | 10 | 6 | 8 | 39 | 7 | 9 | 173 | 136 | 44 | 33 | 5 | 60 | 8 | 9 | 2 | 49 | 3 | 24 | 56 | 1 | 4 | 42 | 80 | 171 | 78 | 90 | 3 | 7 | 20 | 13 | 10 | 0 | 3 | 2 | 1 | 23 | 9 | 1 | 23 | 22 | 37 | 2 | 3 | 17 | 89 | 8 | 15 |
Pisum sativum | 24 | 33 | 18 | 45 | 8 | 7 | 150 | 64 | 98 | 50 | 6 | 10 | 9 | 6 | 33 | 5 | 6 | 126 | 24 | 39 | 25 | 7 | 42 | 9 | 7 | 2 | 41 | 1 | 33 | 41 | 1 | 4 | 37 | 52 | 112 | 71 | 72 | 3 | 7 | 20 | 8 | 10 | 0 | 3 | 1 | 1 | 20 | 7 | 1 | 17 | 21 | 34 | 2 | 2 | 15 | 83 | 8 | 15 |
Phaseolus vulgaris | 27 | 27 | 15 | 42 | 5 | 7 | 172 | 79 | 124 | 38 | 8 | 13 | 6 | 11 | 42 | 7 | 7 | 149 | 27 | 50 | 32 | 5 | 55 | 10 | 7 | 3 | 57 | 1 | 30 | 50 | 1 | 4 | 29 | 49 | 168 | 79 | 89 | 2 | 9 | 20 | 15 | 12 | 2 | 3 | 2 | 1 | 23 | 10 | 1 | 33 | 27 | 40 | 3 | 3 | 16 | 91 | 8 | 19 |
Spatholobus suberectus | 23 | 26 | 9 | 39 | 3 | 7 | 186 | 84 | 117 | 44 | 8 | 12 | 5 | 9 | 38 | 7 | 7 | 149 | 19 | 51 | 31 | 8 | 62 | 11 | 9 | 3 | 57 | 0 | 27 | 54 | 1 | 4 | 45 | 13 | 171 | 71 | 91 | 2 | 9 | 23 | 12 | 12 | 1 | 3 | 3 | 1 | 24 | 10 | 1 | 32 | 30 | 38 | 3 | 3 | 18 | 99 | 10 | 16 |
Senna tora | 26 | 26 | 11 | 41 | 3 | 9 | 158 | 80 | 83 | 49 | 7 | 14 | 6 | 9 | 40 | 7 | 9 | 141 | 72 | 54 | 38 | 7 | 54 | 9 | 13 | 3 | 47 | 1 | 24 | 59 | 2 | 5 | 36 | 78 | 130 | 106 | 103 | 2 | 10 | 22 | 32 | 11 | 2 | 3 | 2 | 1 | 25 | 8 | 0 | 22 | 24 | 32 | 3 | 2 | 15 | 80 | 11 | 17 |
Trifolium pratense | 28 | 30 | 40 | 98 | 4 | 8 | 168 | 70 | 128 | 49 | 11 | 10 | 9 | 9 | 37 | 6 | 7 | 168 | 236 | 50 | 29 | 16 | 56 | 8 | 12 | 2 | 49 | 2 | 23 | 64 | 1 | 5 | 48 | 64 | 167 | 75 | 90 | 2 | 7 | 21 | 17 | 11 | 0 | 3 | 2 | 2 | 20 | 9 | 1 | 25 | 25 | 41 | 3 | 4 | 19 | 99 | 8 | 15 |
Trifolium subterranum | 25 | 30 | 25 | 58 | 4 | 4 | 145 | 71 | 112 | 51 | 10 | 9 | 9 | 9 | 36 | 7 | 7 | 156 | 138 | 48 | 30 | 8 | 49 | 8 | 13 | 2 | 44 | 2 | 21 | 62 | 1 | 4 | 38 | 76 | 150 | 67 | 83 | 3 | 9 | 20 | 15 | 14 | 0 | 2 | 3 | 1 | 22 | 9 | 1 | 22 | 23 | 34 | 3 | 3 | 18 | 84 | 7 | 14 |
Vigna radiata | 21 | 20 | 14 | 28 | 5 | 6 | 148 | 59 | 104 | 37 | 9 | 9 | 5 | 7 | 35 | 7 | 7 | 134 | 55 | 44 | 25 | 6 | 45 | 8 | 7 | 3 | 49 | 1 | 30 | 35 | 4 | 32 | 18 | 148 | 54 | 70 | 2 | 8 | 16 | 13 | 10 | 1 | 0 | 3 | 1 | 1 | 18 | 8 | 0 | 27 | 21 | 38 | 2 | 2 | 16 | 65 | 5 | 17 |
Vitis vinifera | 14 | 19 | 12 | 41 | 5 | 8 | 120 | 56 | 87 | 45 | 3 | 8 | 6 | 8 | 22 | 7 | 3 | 109 | 32 | 38 | 21 | 3 | 48 | 9 | 11 | 2 | 32 | 1 | 17 | 46 | 1 | 2 | 29 | 45 | 133 | 62 | 79 | 3 | 7 | 15 | 10 | 8 | 2 | 4 | 2 | 1 | 19 | 4 | 1 | 19 | 20 | 34 | 2 | 2 | 12 | 59 | 7 | 14 |
Total | 648 | 744 | 385 | 1,240 | 136 | 202 | 4,439 | 2,036 | 3,006 | 1,180 | 203 | 317 | 194 | 225 | 1,023 | 205 | 189 | 3,712 | 3,142 | 1,302 | 798 | 176 | 1,420 | 251 | 257 | 68 | 1,306 | 26 | 633 | 1,353 | 44 | 118 | 1,046 | 1,080 | 3,965 | 2,038 | 2,292 | 64 | 246 | 506 | 355 | 351 | 20 | 80 | 59 | 25 | 579 | 268 | 23 | 729 | 710 | 1,014 | 69 | 82 | 436 | 2,330 | 233 | 478 |