Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g0712 ATGGAGAGGTTCCGGGCAAAGAGGTCAAAGATTGCGGCCCCCACTGATCGGACGGCCTCCGCCATGAAAGAAGGAAACAGGCAGATCCGAAATCAGAGAAATTTTCCAAAATTGGCCTCTGATTTGAGTTCTTGCACTAGTGGTTCTACGGAAGAAGATTCGTTCACGATTGAGTTGGGACCAAGCTCTTCAAAACAAGCAATTGGAACCCCGATGAAGAAGTTGTTAGCTAAAGAGATGTCAAAAGAAGCTGAACCTAAAAAAAGATCACCGAGTGTTATTGCCAGATTGATGGGTCTTGATGGACTGCCACCACAGCAGCCCATTCATAAACAACAAAAGAAGTTAATGGAAAATCATCAACAGAGGACAGAGACAGTAGAAAGAGCTGAAGGTGGTGGCACATTTTATGGCCCCCAATTGCATAGGAAGAAGAATTCAAAGGAGCAGGAGGAATTTAAGGATGTGTTTGAAGTTTTAGTAGCACCAAAAGGGGAAAGCGATTGTTACCAAGTGGAAGGGCAAGGAACTACCAATTCAAAGCTCACTGAGGCCGAGAAGGCATTCATTCGGCAGAAGTTCATGGATGCAAAGCGTCTTTCTACTGATGAAAAGCTTCAGGATTCTCAGGAATTCCATGATGCACTTGAAGTACTGGACTCAAATAAGGACCTTTTGCTGAAATTTCTTCAGGAGCCAGATTCCTTATTCACAAAGCATCTGCAGGATCTGCAAGGTGTGCCTCCTCAGCCCCATTGCCGTCGTATAACAGTTAGTAAGTCATCAAATTCTCCCAAGTATGAAAACAATGCAACAGGCTGGAAATCCAAGAGAGGAACTTCACGGAAGAATGATATTAGCTCTCCTCAAAAACATCATGATGATCATTTCAGTCACTCTTATGGTAAACATGATGCTCATAAATCTCTTCACCCATCAAGAATTCAATTTGAAGGGAGGGATGAGACATCTGTACTGCCCACAAGGATTGTTGTTTTGAAGCCGAATCTTGGGAAGGTGCTGAGCAGTTCTAAATCTATTTCATCACCCCGATCTTCTTATGATTTTCTTTCAGATTGTGGGAAGCATACTGGATCCATGAGTATCAGGAATAAGGAGGCTGAATTGCAGGGATCTAATGAGATGGGGTTCTCAAGGCACAAGTCTAGAGAATCTAGAGAAATTGCAAAAGAAGTCACTAGGAGAATGAGAAATAGTATCACCAATGGTTCCATGAATTTTTCATCTGCTGGGTTTCGAGGCTATGCTGGGGATGAGAGCTCATGTATGTCTGGAAATGATTCCTTGAGTGAACCAGAAGAGACTGTGCTCATTTCGAGAAACTCATTTGACCGGAGTAGCCGATACAGGGCTTCATCATCCCATTCCACGGAGTCTTCTGTAAGCAGGGAAGCCAGAAAGAGACTCTCTGAGAGGTGGAAGATGACTCGTAGGTTTCAAGAAGTGGGAGCAGTAAATAGGGGCAGCACGTTAGCCGAAATGCTTGCTATTTCTGATAAGGAAGTGAGGTCTGAGAATTTGGATTCCATGATTGGTCAAGGTGGATGCAGCAATAGTTTTTCTAGAAATGATGGAACCTCAGAGTGGGCTAGTCCTTTGGGTATCAGCAGTATGGATGGGTGGAAGGATGGATGTGGCAGGCATTTATCAAGATCAAGGTCTCTTCCTGCTTCATCTGATGTCTTTGGAAGTCCTAAGGCAAGCATGCACCATGAAACTCAGGTTGATGGCTGGTATCTGATGTCAAAAGAAGTCATGAACCGGGGAAGAAACAGGACAATAAGGGGGAGTATCGGTCCAAAGGAAAGTCTATCCTCCAGAAACTTAAAATGTAGTAGTAAGAAATCTCAGTCCTCCCGGGACAAAAGTAGGGAGCATAACGACACGTTACAGGAAATTTATTTCAACCACAATGAAATGAAGTGCAACCTTGACGAGAAAGGTCCATCTGAAGAAAAGCCTATGATTTCTGAGACATCGGCTTATAATGCCACTGATACAAATTTAGTTGTTGATACAATAGTGGATGAACAAGAGAACATGGCCATGTCTTCTGAGTCCCCTGACGAGTCGCTCCGAGAATTATCAACATGTATTTTTGTGGAAAATAATTCTTCAACCCATGGCCTTGATGATTCAATTCCACAGGAACCATCAAATGGATCATCTGAGGGAAGTTCAGTTCCTTTGCTGGGCTCAGTGCCTGAACCAGAATCTCCATCAAGCTCCAAGGAGGCTGAACAGCCTAGTCCAGTTTCTGTTCTGGAAACTACCTTTCCAGAAGATTTATCATCTGGTTCTGAATGCTTTGAGAGAGTCAGTGCTGACCTCCAAGGGCTTCGAATGCAACTTCAGCTTCTCAAGTTGGAGACAGATGCTTATGCAGAAGGATCCATGGTTATCTCGAGTGATGAAGATGCTGGAGTTTCAGAAGAGATGGGAATATTTAGAGCTGAGGATAGCTGGGAATCTTCCTACATAGCTGATGTTCTAGTTGACTCCGGCTACAGTGATAGTGACCCTGAGATGTTTGTGGCAGGATGGGAGTCCTCCGAATGCCCTTTGAGTCCCATGATCTTTGAAAAACTTGAAAAGCTGTATAGTGACCATACAACTGGATTGAAGTCGGAAAGGAGGCTAGTGTTTGATCGAATAAATTCAGTACTCATGGAAGTTTTCCAGCCGTTTGTAGACCCTCACCCGTGGGTGAAGATAGGGTCGAGTGTTCATTCCAGATGGCGCAAGGACAGGCTCAACGAAGAAATATATAAGTTGCTGGCAAGGCAGGAGAAGATGGCGAATGATGCCACATTGGAGAAGGAGCTGGAGAGGGAATCAGAGTGGCTGAATTTAGGAGTGGATGTGAATGCAATTGGTATGGAAATAGAGAGGCTGGTGATGGATGAGCTAGTGGACGAAGTTGTGTCCATGTAG 2955 0.442 MERFRAKRSKIAAPTDRTASAMKEGNRQIRNQRNFPKLASDLSSCTSGSTEEDSFTIELGPSSSKQAIGTPMKKLLAKEMSKEAEPKKRSPSVIARLMGLDGLPPQQPIHKQQKKLMENHQQRTETVERAEGGGTFYGPQLHRKKNSKEQEEFKDVFEVLVAPKGESDCYQVEGQGTTNSKLTEAEKAFIRQKFMDAKRLSTDEKLQDSQEFHDALEVLDSNKDLLLKFLQEPDSLFTKHLQDLQGVPPQPHCRRITVSKSSNSPKYENNATGWKSKRGTSRKNDISSPQKHHDDHFSHSYGKHDAHKSLHPSRIQFEGRDETSVLPTRIVVLKPNLGKVLSSSKSISSPRSSYDFLSDCGKHTGSMSIRNKEAELQGSNEMGFSRHKSRESREIAKEVTRRMRNSITNGSMNFSSAGFRGYAGDESSCMSGNDSLSEPEETVLISRNSFDRSSRYRASSSHSTESSVSREARKRLSERWKMTRRFQEVGAVNRGSTLAEMLAISDKEVRSENLDSMIGQGGCSNSFSRNDGTSEWASPLGISSMDGWKDGCGRHLSRSRSLPASSDVFGSPKASMHHETQVDGWYLMSKEVMNRGRNRTIRGSIGPKESLSSRNLKCSSKKSQSSRDKSREHNDTLQEIYFNHNEMKCNLDEKGPSEEKPMISETSAYNATDTNLVVDTIVDEQENMAMSSESPDESLRELSTCIFVENNSSTHGLDDSIPQEPSNGSSEGSSVPLLGSVPEPESPSSSKEAEQPSPVSVLETTFPEDLSSGSECFERVSADLQGLRMQLQLLKLETDAYAEGSMVISSDEDAGVSEEMGIFRAEDSWESSYIADVLVDSGYSDSDPEMFVAGWESSECPLSPMIFEKLEKLYSDHTTGLKSERRLVFDRINSVLMEVFQPFVDPHPWVKIGSSVHSRWRKDRLNEEIYKLLARQEKMANDATLEKELERESEWLNLGVDVNAIGMEIERLVMDELVDEVVSM* 985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g0712 984 MobiDBLite consensus disorder prediction 711 736 - -
Vvi8g0712 984 PANTHER AFADIN 29 983 - -
Vvi8g0712 984 Pfam Domain of unknown function (DUF4378) 831 980 IPR025486 -
Vvi8g0712 984 Coils Coil 777 797 - -
Vvi8g0712 984 MobiDBLite consensus disorder prediction 255 277 - -
Vvi8g0712 984 MobiDBLite consensus disorder prediction 711 760 - -
Vvi8g0712 984 Pfam Protein of unknown function (DUF3741) 191 235 IPR022212 -
Vvi8g0712 984 MobiDBLite consensus disorder prediction 605 620 - -
Vvi8g0712 984 MobiDBLite consensus disorder prediction 113 127 - -
Vvi8g0712 984 MobiDBLite consensus disorder prediction 743 760 - -
Vvi8g0712 984 Pfam DUF761-associated sequence motif 83 107 IPR032795 -
Vvi8g0712 984 MobiDBLite consensus disorder prediction 454 474 - -
Vvi8g0712 984 MobiDBLite consensus disorder prediction 98 149 - -
Vvi8g0712 984 MobiDBLite consensus disorder prediction 21 68 - -
Vvi8g0712 984 MobiDBLite consensus disorder prediction 1 68 - -
Vvi8g0712 984 MobiDBLite consensus disorder prediction 278 308 - -
Vvi8g0712 984 MobiDBLite consensus disorder prediction 598 634 - -
Vvi8g0712 984 MobiDBLite consensus disorder prediction 243 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi8g0712 Vvi-Chr8 13704523 13711120 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi8g0712 69 982 TRM (TON1 Recruiting Motif) Superfamily AT3G53540 41.183 0.0 550
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g0712 - - vvi:100248303 1874.37