Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g0285 ATGCGCATTATAATTTATGGAGAATGCACTGCACCCCCTTTAGACACTCTGAAGCGTGTTGTGAAGGAAAGAGACGAGACCATATTAGCCACTTCTCTACCTTACACTCGGTTCCTAAAATCAGGAGTTGATTCTGCCATTTTTAGCCCTAGAATGCCATGTGTTGATTTTTGGGTGCAGAGTTCCTGA 189 0.4339 MRIIIYGECTAPPLDTLKRVVKERDETILATSLPYTRFLKSGVDSAIFSPRMPCVDFWVQSS* 63
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g0285 62 PANTHER BRCA1 C TERMINUS DOMAIN CONTAINING PROTEIN, EXPRESSED 1 60 IPR044254 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi8g0285 Vvi-Chr8 7679983 7680171 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi8g0285 1 60 Core DNA Replication Machinery Family AT4G02110 60.000 4.40e-20 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g0285 K10728 - vvi:100257310 98.5969