Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g0975 ATGATGATGTTTGATGAAATGGGAATTTGCGGTAATCTTGAGTTTATGTCCGTTCCTTTCATGGAAGGAGACATGGCTGCCTCTCAGCCTGAACAGGTGGCCCCTGTGGATGATGAATATACTGATGAAGAGATGGATGTGGATGAGCTACAGAGGAGGATGTGGAGAGATAAATTACGCCTCAAGCGGCTTAAGGAACAGAAAGAGGATCAGAATGGAGCTGATACTGTTAAGCAGCGGCAGTCTCAGGAGCAGGCAAGGAGGAAGAAAATGTCAAGGGCACAAGATGGGATACTGAAATACATGTTGAAGATGATGGAAGTTTGTAAAGCTCAGGGCTTTGTATATGGTATTATTCCAGAGAAGGGAAAGCCAGTGAGTGGGGCCTCTGACAATCTTCGAGAGTGGTGGAAGGACAAAGTCAGGTTTGATCGGAATGGCCCAGCTGCCATAGCAAAGTACCAAGCGGACAATTTGATCCCAGGGAAACAAGAAGGCTGTAATTCAGTTGGTCCTACTTCACACACCTTGCATGAGCTTCAAGACACAACCCTTGGTTCACTCTTATCTGCACTCATGCAGCATTGTGAACCCCCACAGAGGCGGTTTCCATTAGAGAAGGGTATCCCACCGCCATGGTGGCCTACTGGGAATGAGGAATGGTGGCCCCAGCTGGGTTCACCAAAAGATCAGGGTCCTCCTCCTTACAAAAAGCCTCATGATTTGAAGAAGGCATGGAAGGTGAGTGTTCTGACTGCAGTTATGAAGCATATGTCACCTGATATTTCAAAAATTCGCAAGCTTGTGAGGCAGTCCAAGTGCTTGCAAGACAAGATGACGGCCAAGGAGAGTGCCACATGGCTTGCTATCATCAACCAGGAGGAGGCCTTAGCCAGAAAGCTTTACCCTGATTACCGCCCCCCTTTGTCCTCTGCTAGTGGGAGTGGGTCTTTTTCCATCAAGGATTGCGGCGAGTACGATGTTGAAGGGGTTCAGGATGAACTGAGTTTTGAGATTCAGGAATGCAAACCTGATAGCAGCAATTTTTCCAATTTGAATGTGGAGAAAATGAGCCCAAGGCTGCCAGTTCCACAACTGCCTTACCCGATGAAGGGAGAAGTTGTCACCAACTTGGATTTCCTTCACAAGAGAAAGCCATCTCATGATCTGGAGATGATGATGGATCACAAGATTTATACATGCGAGTTTCTTCAGTGTCCTCACAGTGAACCCCAGTTCGGTTTCCATGACAGGATTTCTCGGGATAATCATCAACTGACTTGCTCTTATAGAAGCAATTCCTCAGAGTTTGGAATGTTGAATCTTCATGTTAATGAAGTTAAACCAGTTGCTTTCCCTCTACCCTTTGGCCAACCCAAGCCTGCCGCTCCAGCAGCTAACTCTGCCTCGGCTTCATTCGACCTATCAGGACTTGGAGTTCCTGAAGATGGTCAGAAAATGATTGGTGATCTCATGTCATTTTATGACACCAACATTCAAGGGAGCAAGGTCTCGAATCCCAGGAGCATTGCAGTCACAAATGACCAAAACCTTCAGCATCCGAAGCGTCAACATCATCAGAACAACTCCTTTCATGGATTCTTGCAAGAATCCAACATGACCCACAATCACCACATGTTCCCCCGAGAGGAAAGCCAGTTTGATCGGTCTAAGCTTTTGAATTCTCGATTCGAGACCAGCCCGAACGAAAACGCTTTCCAGTTTATATATGGGCCTGCTTTCGATTTGTCATCAATCGATTATGTGGAGGACATTCCAGCAACGACTGCAACAGATATTTCATCAAAGCAGGATGCTTCTATCTGGTATTGA 1833 0.4648 MMMFDEMGICGNLEFMSVPFMEGDMAASQPEQVAPVDDEYTDEEMDVDELQRRMWRDKLRLKRLKEQKEDQNGADTVKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVSGASDNLREWWKDKVRFDRNGPAAIAKYQADNLIPGKQEGCNSVGPTSHTLHELQDTTLGSLLSALMQHCEPPQRRFPLEKGIPPPWWPTGNEEWWPQLGSPKDQGPPPYKKPHDLKKAWKVSVLTAVMKHMSPDISKIRKLVRQSKCLQDKMTAKESATWLAIINQEEALARKLYPDYRPPLSSASGSGSFSIKDCGEYDVEGVQDELSFEIQECKPDSSNFSNLNVEKMSPRLPVPQLPYPMKGEVVTNLDFLHKRKPSHDLEMMMDHKIYTCEFLQCPHSEPQFGFHDRISRDNHQLTCSYRSNSSEFGMLNLHVNEVKPVAFPLPFGQPKPAAPAANSASASFDLSGLGVPEDGQKMIGDLMSFYDTNIQGSKVSNPRSIAVTNDQNLQHPKRQHHQNNSFHGFLQESNMTHNHHMFPREESQFDRSKLLNSRFETSPNENAFQFIYGPAFDLSSIDYVEDIPATTATDISSKQDASIWY* 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g0975 610 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 29 555 IPR006957 GO:0003700|GO:0005634
Vvi6g0975 610 FunFam Ethylene insensitive 3-like 1 168 305 - -
Vvi6g0975 610 Pfam Ethylene insensitive 3 48 295 IPR047091 GO:0003700
Vvi6g0975 610 Coils Coil 47 67 - -
Vvi6g0975 610 Gene3D - 80 157 IPR023278 GO:0003700|GO:0005634
Vvi6g0975 610 SUPERFAMILY DNA-binding domain of EIN3-like 174 298 IPR023278 GO:0003700|GO:0005634
Vvi6g0975 610 Gene3D - 172 305 IPR023278 GO:0003700|GO:0005634
Vvi6g0975 610 FunFam Ethylene insensitive 3-like 1 80 158 - -
Vvi6g0975 610 MobiDBLite consensus disorder prediction 66 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi6g0975 Vvi-Chr6 13082072 13083904 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi6g0975 2 610 EIL Transcription Factor Family AT3G20770 56.923 0.0 671
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Vvi6g0975 EIN3 4.2e-130 No_clan