Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g0172 ATGGGAGAATTTGAAGAGATTGGAGTTGATATGTGCATGTTGGGTGACAGCTCTGATATAGAAGTTGATGAGGTAAGGTGTGAAAATATCGCGGAGAAAGATGTCAGTGATGAAGAGATTGAAGCAGAGGAATTGGAGAGACGAATGTGGAAGGACCGTATTAAACTCAAGAGGATCAAGGAAAGACAAAAGATCACAGCCCAACAGGCTGCCGAGAAGCAGAAGCCCAAACCGAATGCTGATCATGCTCGGAGGAAGAAAATGTCTAGAGCGCAAGATGGGATTCTTAAATACATGCTGAAGCTGATGGAGGTGTGCAAAGCTCGTGGGTTCGTGTATGGGATCATTCCTGAGAAGGGTAAACCAGTAAGTGGTGCATCTGACAATATAAGAGCTTGGTGGAAAGAAAAGGTGAAGTTTGATAAGAATGGGCCAGCAGCCATAGCCAAATATGAGGCAGAATGCCTTGCCATGGTCGAAAATGAGAATAATCGAAATGGAAATTCTCAAAGCACCCTTCAAGACCTGCAGGATGCAACGTTGGGGTCACTTTTGTCTTCCTTGATGCAACACTGTGATCCGCCTCAGAGGAAGTATCCACTAGAGAAGGGTGTTCCGCCACCTTGGTGGCCTTCAGGGAATGAGGATTGGTGGGTTAAATTAGGTTTAGCGAGAAGCCAAAGTCCTCCTTATAAGAAACCACATGATCTGAAAAAGATGTGGAAAGTTGGAGTGTTAACAGCTGTGATCAAGCATATGTCACCTGATATTTCTAAGATCAGGAGGCTTGTTCGGCAGTCGAAATGCTTACAGGATAAGATGACTGCAAAGGAGAGCTCGATTTGGTTGGGGGTTTTGAACCGAGAGGAATCCCTCATCCGGCAGCCTAGCAGTGATAATGGGACATCTGGCATCACTGGAACACCTCCAAATGGTCATGATGGAAAGAACAAAGTCGCTGTTAGCAGTGACAGTGATTATGATGTTGATGGTGTTGATGATGGTGTGGGCTCTGTTTCATCCAAAGATGACAGGAGAAATCAGCAGATGGATATAGCGTCATTTGAAGATGATCGCGATAATAGTGGTGCCCAGCCTGTCCAAGATAAAAAAAAGGGGCGAAAACAACTTAAGAGAAAGAGACCCCATGTGAAATCCAGGCCTGTCAATCAAGAGTCTGCACCATCTCTAGAAGAGAATCTACATGAGGAGTCAAGAAACTCTCTGCAACATCTACATAATGAGCCAAGAAATTCTTTGCCTGATATAAACCACAATGATGCTCAGTTGGCTCCATACGAGATGCTTGGCACCCAACAGGAAAATGATAGAGTCACATCTTTGAGGCCTCTGGAGAAAGATCTTGAGAATCAATCCCAGTTACCAGAACCTGAATTTAACCATTTCTCTGCTTTTCCTTCTGCCAATGCAATCTCCACGCAGAGCATGTATGTGGGTGGCAGGCCTTTGCTTTACCCTGCAGTGCAAAATGCTGAGTTGCATCATGGAACTCCTTATGAATTCTATAATCCACCATCTGATTATGGGCACAATCCTGATGGACAACAATCCCATATGGCAATGAATGAAACCCAGATGAGGCTGGAGGATGGCAGAATTCACGAACCTGAACTAAATAGAAATGGAAATGATATTTCTGGTGGTAACTTGCGTCATTATGTAAAAGACACATTTCATAGTGGGCAAGATAGACCTGTGGAAAGTCATTATGGGTCTCCAATCGAGAGCCTGTCACTAGATTTTGGAGGATTCAATAGTCCGTTTGATCTTGGAATTGATGGGACTTCATTAGGTACCCCTGATATAGACTATTTGCTTGACGATGACTTGATCCAATACTTCGGAGCATAG 1872 0.4412 MGEFEEIGVDMCMLGDSSDIEVDEVRCENIAEKDVSDEEIEAEELERRMWKDRIKLKRIKERQKITAQQAAEKQKPKPNADHARRKKMSRAQDGILKYMLKLMEVCKARGFVYGIIPEKGKPVSGASDNIRAWWKEKVKFDKNGPAAIAKYEAECLAMVENENNRNGNSQSTLQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGVPPPWWPSGNEDWWVKLGLARSQSPPYKKPHDLKKMWKVGVLTAVIKHMSPDISKIRRLVRQSKCLQDKMTAKESSIWLGVLNREESLIRQPSSDNGTSGITGTPPNGHDGKNKVAVSSDSDYDVDGVDDGVGSVSSKDDRRNQQMDIASFEDDRDNSGAQPVQDKKKGRKQLKRKRPHVKSRPVNQESAPSLEENLHEESRNSLQHLHNEPRNSLPDINHNDAQLAPYEMLGTQQENDRVTSLRPLEKDLENQSQLPEPEFNHFSAFPSANAISTQSMYVGGRPLLYPAVQNAELHHGTPYEFYNPPSDYGHNPDGQQSHMAMNETQMRLEDGRIHEPELNRNGNDISGGNLRHYVKDTFHSGQDRPVESHYGSPIESLSLDFGGFNSPFDLGIDGTSLGTPDIDYLLDDDLIQYFGA* 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g0172 623 Coils Coil 28 62 - -
Vvi6g0172 623 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 19 597 IPR006957 GO:0003700|GO:0005634
Vvi6g0172 623 FunFam Ethylene insensitive 3-like 1 164 300 - -
Vvi6g0172 623 Pfam Ethylene insensitive 3 43 290 IPR047091 GO:0003700
Vvi6g0172 623 MobiDBLite consensus disorder prediction 65 88 - -
Vvi6g0172 623 SUPERFAMILY DNA-binding domain of EIN3-like 171 294 IPR023278 GO:0003700|GO:0005634
Vvi6g0172 623 Coils Coil 159 179 - -
Vvi6g0172 623 MobiDBLite consensus disorder prediction 337 371 - -
Vvi6g0172 623 FunFam Ethylene insensitive 3-like 1 77 155 - -
Vvi6g0172 623 Gene3D - 78 153 IPR023278 GO:0003700|GO:0005634
Vvi6g0172 623 Gene3D - 163 301 IPR023278 GO:0003700|GO:0005634
Vvi6g0172 623 MobiDBLite consensus disorder prediction 397 411 - -
Vvi6g0172 623 MobiDBLite consensus disorder prediction 293 310 - -
Vvi6g0172 623 MobiDBLite consensus disorder prediction 293 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi6g0172 Vvi-Chr6 2026364 2029431 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi6g0172 21 595 EIL Transcription Factor Family AT1G73730 56.336 0.0 579
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Vvi6g0172 EIN3 4.6e-127 No_clan