Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g0961 ATGGCAGAAGTGAAGCTAAAAGGAACATGGCCTAGTCCATTTAGTTACAGGGTCATATGGGCTCTGAAACTGAAGGACATACCATATGAGTACATAGAAGAAGATCTTTCCAACAAAAGTCCCATGCTTCTGCAGTACAACCCTGTTCACAAGATGATCCCAGTGCTTGTTCATGGAGGAAAACCTATCTTTGAGTCAGCGGTTATCCTTCAATACATTGAAGAGGTGTGGCCGCAGAATCCATTGCTGCCAAATGACCCTTATGAAAGAGCTGTGGCACGTGTGGACCCGCATTTTTCACGTACACTCAGGCGTCTTCTCAGAAATAAGCATGATGTGCCCATTGCATCTAAATCAACAAGATCAGCTGTTTTTATGGGCATTTCTGCTGATACAGAACAACACAAATCTGTTGAGCTCAAGAATGAAGCTGTGCAGGGGCTTCATATTGTCCATCATTAA 462 0.4351 MAEVKLKGTWPSPFSYRVIWALKLKDIPYEYIEEDLSNKSPMLLQYNPVHKMIPVLVHGGKPIFESAVILQYIEEVWPQNPLLPNDPYERAVARVDPHFSRTLRRLLRNKHDVPIASKSTRSAVFMGISADTEQHKSVELKNEAVQGLHIVHH* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g0961 153 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 81 IPR004045 -
Vvi5g0961 153 Pfam Glutathione S-transferase, N-terminal domain 5 74 IPR004045 -
Vvi5g0961 153 CDD GST_N_Tau 4 77 - -
Vvi5g0961 153 SUPERFAMILY Thioredoxin-like 1 83 IPR036249 -
Vvi5g0961 153 Gene3D Glutaredoxin 1 85 - -
Vvi5g0961 153 SFLD Glutathione Transferase (cytosolic) 8 98 IPR040079 -
Vvi5g0961 153 PANTHER GST N-TERMINAL DOMAIN-CONTAINING PROTEIN 1 99 - -
Vvi5g0961 153 FunFam Tau class glutathione S-transferase 1 85 - -
Vvi5g0961 153 SFLD Main (cytGST) 8 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi5g0961 Vvi-Chr5 10857802 10861346 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi5g0961 3 94 Glutathione S-transferase Gene Family AT2G29450 70.652 2.37e-41 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g0961 K00799 - vvi:100256295 197.208