Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g0650 ATGCATTCTCTTCCTAATAAGAAGGAGAGTAGCAAACTCCCCGCTAACACTCCTTCCTTTGTTGTCGTTAATGTTAAGCCTCACCTTGCCTTATCGAACATTGATCACACAGGTCTCACTGCAATAGTGAAAGAGAAAAACATAGACCAGCTTCGTGAATGTGGAGGAGTTGAAGGTGTGGCTGGTGCTCTAAAAACAGATACCAAAAATGGCCTCCATGGTGCTGTTGAAGATGTTGCTCAGAGGCAGGAAGTGTTCGGTTCAAACACATACCAAAGGCCGCCTACTAAAAGCTTCTTCTACTTTGTGGTGGATGAAGAGAATTGA 327 0.4404 MHSLPNKKESSKLPANTPSFVVVNVKPHLALSNIDHTGLTAIVKEKNIDQLRECGGVEGVAGALKTDTKNGLHGAVEDVAQRQEVFGSNTYQRPPTKSFFYFVVDEEN* 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g0650 108 SUPERFAMILY Calcium ATPase, transmembrane domain M 54 105 IPR023298 -
Vvi5g0650 108 PANTHER CATION TRANSPORTING ATPASE 17 106 - -
Vvi5g0650 108 Pfam Cation transporter/ATPase, N-terminus 56 104 IPR004014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi5g0650 Vvi-Chr5 6127205 6127531 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi5g0650 23 105 Primary Pumps ATPases AT3G63380 39.759 3.15e-17 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g0650 K01537 - vvi:100242476 179.489