Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0731 ATGTTGACAGTTCAACAGCTCAACCCAACCATCACCGATATAAATGAGCTGATAAAGAAAGGGGAGCGTGTAGGTTGCCAACATGCCTCTTTCGTTCATGAATTCTTGATCAAATGGATGAAATTTGATGAGTCTAAGCTAGTAATCTATGAGTCACCAGAAGAACTGGATGAATTATTTTCAAAAGGTGGAATTGCTGCTGCATTTGATGAAATCCCTTACATGAAGATTTTCCTTGCAAAATATTGCTCCAAATACACTGCAGTCGGACCAACGTACAAGTTTGATGGCTTTGGATTTGTGTTTCCAAAGGGTTCACCCCTTGTAGCTGATGTTTCAAGGCAAGTCTTAAACGTGACAGAGGGAGCTAAAATGCTACAATTTGAGAAGGCATGGTTTGGGCAACCAACCAGTTGTCCAGAGCTCACCAACTCAGTTTCTTCAAACAGCATCGGCCTGAATAGCTTTTGGGGCCTATTCCTCATTGCTGGAGTCGCTTCATTTGTAGCTCTCATCACATGCATCACCACATTCCTTTATGAAAATAGAGATGCCTTAATAAACTTGAATTCCCCATCTTCGATATGGAGAAAAATTAAAGCCATGGTGACACGCTTTGACGACAAAGATCTTAGGTCCCATACTTTTAGAGAAAGCGATCAACTTCAAGACGAGCGACATCAAAGCCATGGATGCAGCTACACCAACTTCCCTCCAAGTCCATCGAGCCTTTTGATCCCAACACACAATAATTATGCTTTCTTCGGAGAACAAGGAACACCTTCTTCTGGACATGCTGATCCAGTCGGTCCAAATCGGCCAATGTCTCCACATATAATGTTTGAATATGAGCTTGCTAATATAAATCACGAGTAA 876 0.4178 MLTVQQLNPTITDINELIKKGERVGCQHASFVHEFLIKWMKFDESKLVIYESPEELDELFSKGGIAAAFDEIPYMKIFLAKYCSKYTAVGPTYKFDGFGFVFPKGSPLVADVSRQVLNVTEGAKMLQFEKAWFGQPTSCPELTNSVSSNSIGLNSFWGLFLIAGVASFVALITCITTFLYENRDALINLNSPSSIWRKIKAMVTRFDDKDLRSHTFRESDQLQDERHQSHGCSYTNFPPSPSSLLIPTHNNYAFFGEQGTPSSGHADPVGPNRPMSPHIMFEYELANINHE* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0731 291 FunFam Glutamate receptor 2.7 45 141 - -
Vvi4g0731 291 SMART GluR_14 1 135 IPR001320 GO:0015276|GO:0016020
Vvi4g0731 291 Pfam Bacterial extracellular solute-binding proteins, family 3 9 135 IPR001638 -
Vvi4g0731 291 Gene3D - 85 141 - -
Vvi4g0731 291 SUPERFAMILY Periplasmic binding protein-like II 3 139 - -
Vvi4g0731 291 Gene3D - 1 84 - -
Vvi4g0731 291 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 1 217 IPR015683 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0731 Vvi-Chr4 8183979 8184920 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g0731 2 246 Ion Channels AT2G29110 48.178 4.49e-70 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0731 K05387 - vvi:100241108 551.592