Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0528 ATGTCCATAGTTGCAGAAGTGCCGAGTTTCCTTCAAGTCCTTTCCAATGGTTTAGTAAAACGCTTTGAACCTGAAATCTCCCCTGTCTCAAATGAGTCATCATCCCATGGATACAAGTCCAAGGATGTGATGATTGACTCAACCAAGTCAATCTCTGGCAGAATGTTTCTGCCTGATACTCCAGGCTCCTCTAGCCACCTTCCTGTTCTAGTTTACTTCCATGGTGGTGGCTTCTGCATTGGCTCAACCACATGGCTTGGGTACCATACTTTCCTTGGGGATTTAGCAGTTGCCTCACAAACTATAGTTCTTTCTGTGGACTACCGCCTTGCGCCTGAAAACAGGCTCCCTATAGCTTATGATGATTGTTATAGTTCACTTGAGTGGCTAAGTAACCAAGTCAGCTCTGAACCATGGCTTGAGAGAGCCGACCTCTCTCGTGTGTTTCTCTCAGGGGATAGTGCTGGAGGGAACATTGCTCACAATGTTGCTCTCAAAGTAATTCAGGAAAAAACTTATGATCATGTAAAGATTAGAGGATTGTTGCCCGTACATCCTTATTTTGGGAGTGAGGAGAGGACTGAGAAGGAGAGGGAAGGTGAAGCAGCTGGATATGTTGCGATGAACGATTTGTTATGGAAACTAAGCTTGCCCCAAGGATCAAACCGGGACTATTCTGGGTGTAACTTTGAAAGGGCTGCAATTTCCAGTGCTGAATGGGGTCGTTTTCCAGCAGTGGTAGTATATGTGGCTGGTTTGGATTTCTTGAAAGAAAGGGGAGTTATGTATGCAGGTTTTTTGGAGAAGAAAGGGGTGGAGGTGAAGCTGGTGGAAGCTGAAGATCAGTCACATGTGTATCATGTGTACCATCCTCAATCTGAGGCTACCCATCTTCTTCAAAAGCAAATGAGTGAGTTCATCCACAGCTTCTAG 933 0.4534 MSIVAEVPSFLQVLSNGLVKRFEPEISPVSNESSSHGYKSKDVMIDSTKSISGRMFLPDTPGSSSHLPVLVYFHGGGFCIGSTTWLGYHTFLGDLAVASQTIVLSVDYRLAPENRLPIAYDDCYSSLEWLSNQVSSEPWLERADLSRVFLSGDSAGGNIAHNVALKVIQEKTYDHVKIRGLLPVHPYFGSEERTEKEREGEAAGYVAMNDLLWKLSLPQGSNRDYSGCNFERAAISSAEWGRFPAVVVYVAGLDFLKERGVMYAGFLEKKGVEVKLVEAEDQSHVYHVYHPQSEATHLLQKQMSEFIHSF* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0528 310 Gene3D alpha/beta hydrolase 12 309 IPR029058 -
Vvi4g0528 310 PANTHER ARYLACETAMIDE DEACETYLASE 21 293 - -
Vvi4g0528 310 SUPERFAMILY alpha/beta-Hydrolases 33 308 IPR029058 -
Vvi4g0528 310 Pfam alpha/beta hydrolase fold 70 287 IPR013094 GO:0016787
Vvi4g0528 310 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 148 160 IPR033140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0528 Vvi-Chr4 4833640 4834572 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g0528 3 308 Carbohydrate Esterase AT5G16080 34.891 2.40e-66 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0528 - - vvi:100262880 623.624