Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0991 ATGGAGAACTACACTTATACCTCCTATGCGGACTCCGGCGAGTCTTCGCCCAGATCCAGAGAGCTGGAGTTTGAAAACAGTGGCGCCGCTTCATGGGAGGACCAGCCTCTCCACCAACCTTCCAAGGTCAAGTTCATGTGCAGCTATGGCGGCAAGATCCAACCTCGTCCCCACGATAACCAGCTCTCCTACACCGGCGGCGAGACCAAGATTCTCTCTGTTGATCGCTCCATCAAGTTCTCCCCCCTAATCAACAAGCTCTGCGCCCTCTGCGAGGCCGACGTCTGCTTCAAGTACCAGCTTCCCGGAGAGGATCTCGACGCTTTGATCTCTGTCACCAACGACGACGATCTCGAGCACATGATGCACGAGTACGACCGCTTGTGTAGGCCGTCGGCCAAACCCGCCAGGCTGAGGTTGTTCCTTTTTCCCGCCACTCCGCCCAGTGTTGGCTCCGGTGACATGAAAACCGAGCGTGAGCGGTTCTTTGAGGCTATGAATTCGGGTCCGATTCAATCCGTTGACGCGACATCGCCTCCGGCAACCGCGCCGCCGAGCAATGTGGATTTTTTGTTCGGTCTGGACAAAGGGGTCTCGCCGCCTGCTCCGGTGGCGAAGTTGCCAGTTCCGGTGCCGGAGCCGCCTGTTCCGGCGGAGATTCCGTCCTTGGTTAATCCCGGCGGTGACGGTCGGGTTTTCGCAGCCGATTTGGGGGTGAACCAGGCAGAGATCCAGAGGCAAATCCAGGATCTGCAGAGACTGCAAATTTCGGCTCAAGAACAAGGCGCGTATCAGAGGAAAAGCGACGACAACATGTACGGAGGTTATGCCGGAGATTACTATGTCCAAAAAATGCCGGAAAAGGCGCCGCCACAGTCGACGATTCCAGCAACCGTTCCCGCCACATACTGGCAGGAGAAACGCGCCCCTGGCGGGGGCTTTCCGGGGGGTGTGCCAGCGACGCCAGGACTACAGGAACAACCGGTGTACATGATTCCAGCTCCGGCGAGCGTCTATCACACGCCAGTGGCGCGACCGGTGACTGGTCAATCCGGTCAGGGTTACTATGCGATGAGGATGGGTCCAGATGTTTACCGTGAACAGACGCCAATGTACAGCGTCATGCAGCAGCCACCTGTACAGGCTACTATGCCAGCTCCGGCGCCGAAATTACCGAATTACAGCGAAGGACTTGGAATGGGACGGCCAAGCGGAGTTGGGGTGGCGGATACGGGGTACACTCAGGTGGCGTACGATAGTCAGGGGAGGCAGGTGTACTACACTGCGCCGGGTGGTGTAGTTGCGCCGTATCAGACAATGGCGGCGGTCAGCACCACATCTGGACCGTTGAATCAAGAGAGCGGCAAGGTAACCGCGGCCAAGCTTTCACAAGCATCGGTGTGA 1404 0.5805 MENYTYTSYADSGESSPRSRELEFENSGAASWEDQPLHQPSKVKFMCSYGGKIQPRPHDNQLSYTGGETKILSVDRSIKFSPLINKLCALCEADVCFKYQLPGEDLDALISVTNDDDLEHMMHEYDRLCRPSAKPARLRLFLFPATPPSVGSGDMKTERERFFEAMNSGPIQSVDATSPPATAPPSNVDFLFGLDKGVSPPAPVAKLPVPVPEPPVPAEIPSLVNPGGDGRVFAADLGVNQAEIQRQIQDLQRLQISAQEQGAYQRKSDDNMYGGYAGDYYVQKMPEKAPPQSTIPATVPATYWQEKRAPGGGFPGGVPATPGLQEQPVYMIPAPASVYHTPVARPVTGQSGQGYYAMRMGPDVYREQTPMYSVMQQPPVQATMPAPAPKLPNYSEGLGMGRPSGVGVADTGYTQVAYDSQGRQVYYTAPGGVVAPYQTMAAVSTTSGPLNQESGKVTAAKLSQASV* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0991 467 MobiDBLite consensus disorder prediction 1 15 - -
Vvi3g0991 467 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 62 145 - -
Vvi3g0991 467 Gene3D - 63 144 - -
Vvi3g0991 467 PANTHER OS05G0427100 PROTEIN-RELATED 9 376 - -
Vvi3g0991 467 SMART PB1_new 57 145 IPR000270 GO:0005515
Vvi3g0991 467 MobiDBLite consensus disorder prediction 447 467 - -
Vvi3g0991 467 CDD PB1_UP2 46 143 - -
Vvi3g0991 467 MobiDBLite consensus disorder prediction 1 34 - -
Vvi3g0991 467 SUPERFAMILY CAD & PB1 domains 58 150 - -
Vvi3g0991 467 Coils Coil 241 261 - -
Vvi3g0991 467 Pfam PB1 domain 58 144 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0991 Vvi-Chr3 11039329 11040732 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0991 39 168 MAP Kinase Kinase Kinase AT5G57610 45.588 1.42e-30 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0991 - - vvi:100254138 897.116