Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0457 ATGATTTGGGATTGGATGGGTTGGAATCGGAGAGTTGTGAGGAGTGGTTGGAGAAAGAAGATGCAGTGGTATACTCTAGGGATTTTCGGAAGAACCCCATCTTGGTTTCCGGTGCTGAGCAGGAGTGGAAAACTTGTGCTGTGGGATGTAAGTTTGAATATAATTCCCATGGTAAGCTTGATGCTTCATTTGGTATACCTCAACCAGCTGGAACAGCTAGTGTCATTCGATCAATGGAATCAGCTCAGTACTATTCAGAGAACAAAATCGATCTGGCACGACGGTGGGAGGGGATATGATATTATAATGACAACCAGTCTCTCATCTGATGTTCCTGTTGGGTATTTTTCATGGGCTGAGTATGATATTATGGCACCAGTGCAACCAAAAACTGAAAGTGCCATTGCAGCTGCTTTCATTTCCAATTGTGGTGCTCGTAACTTCCGCTTACAAGCTCTTGAAGCACTTGAAAAAGCAAATGTCAAGATAGATTCCTACGGTGGTTGCCATCGGAACCGTGATGGAAGAGTGGACAAAGTACAAGCACTGAAGCACTACAAATTTAGCCTGGCTTTTGAGAATTCCAATGAGGAGGATTATGTTACTGAAAAATTCTTCCAGTCTCTTGTTGCTGGAAGTGTACCTGTGGTTATTGGCGCTCCGAATATTCAAGACTTTGCCCCTTCTCCTGGTTCTATTTTACATATTAAGGAGCTTAAAGATGCTGAACCGGTTGCAAAGACCATGAAATATCTTGCAGAACACCCTGAGGAATACAACCAATCATTAAGGTGGAAGTATGAGGGCCCATCTGATTCTTTCAAGGCCCTTGTAGATATGGCAGCGGTCCATTCTTCTTGCCGTCTTTGCATTCACCTGGCAACAGCAATTAGAGAGAAAGAAGAAAATAGCCCAGGTTTCCAGAAACGCCCTTGCAAGTGCACTAGAGGCTCAGAAACGGTGTATCATTTATACATAAGAGAAAGAGGGAGGTTTGAAATGGAATCCATTTTCTTGAGGTCTGGGAATTTGACTCTGGAGGCCCTGCAATCTGCGATTCTCAAGAAGTTCAAGTCTCTGAATCATGTACCCATTTGGAAAGAAGAAAGACCAGAAAGCATAAGAGGAGATAACGAACTTAAAGTATACAGAATATATCCTGTTGGGTTGACACAGAGGCAAGCTTTGTATACATTCAAATTTGAAGGGGATGCTGATCTTAGAAGTCATGTTGAAAGCAACCCATGTGCGAAGTTTGAAGTCATATTTGTCTAG 1275 0.4275 MIWDWMGWNRRVVRSGWRKKMQWYTLGIFGRTPSWFPVLSRSGKLVLWDVSLNIIPMVSLMLHLVYLNQLEQLVSFDQWNQLSTIQRTKSIWHDGGRGYDIIMTTSLSSDVPVGYFSWAEYDIMAPVQPKTESAIAAAFISNCGARNFRLQALEALEKANVKIDSYGGCHRNRDGRVDKVQALKHYKFSLAFENSNEEDYVTEKFFQSLVAGSVPVVIGAPNIQDFAPSPGSILHIKELKDAEPVAKTMKYLAEHPEEYNQSLRWKYEGPSDSFKALVDMAAVHSSCRLCIHLATAIREKEENSPGFQKRPCKCTRGSETVYHLYIRERGRFEMESIFLRSGNLTLEALQSAILKKFKSLNHVPIWKEERPESIRGDNELKVYRIYPVGLTQRQALYTFKFEGDADLRSHVESNPCAKFEVIFV* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0457 424 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 92 299 - -
Vvi3g0457 424 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 86 374 IPR001503 GO:0006486|GO:0008417|GO:0016020
Vvi3g0457 424 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 134 298 IPR001503 GO:0006486|GO:0008417|GO:0016020
Vvi3g0457 424 Gene3D - 98 273 IPR038577 -
Vvi3g0457 424 FunFam Glycoprotein 3-alpha-L-fucosyltransferase A 83 273 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0457 97 424 Xyloglucan Fucosyltransferase1 AT3G19280 78.963 0.0 568
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0457 K00753 - vvi:100255469 664.84