Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0649 ATGGCGAATCTTCTACAACTCACTGTCCTCACCTTCTTCTTCATCTCAACCGCCTCAGCCATTGACGAAACTTCAGCTTCATCTCCAGATTCATCATCGCTTCAGCCACCACCATCTCCCTTTCCACGGGACAAAGACCACCCCTTCTCTCCTACATCTCTCTTCAGTCCCATCTTGATCAACCTTGGCTTCCATGATCTTGCCATGGCCATTCATTCTGTTACCGACTCCACCTTCACCGCCTGGAGCGGACCTACCACCATCTTCGCTCCAACCGATGCTTCCATCCGCTCATGTATGTCCTGCTCAGTACCTCGCCTCCTCAAAGAACACATTGTTGCAGGCGCTTTCTCCTTCCACTATCTGCGCACGTTAGCGTTCGGGACCAAGATAGAGACCATGGTCCCCGGTCGATGCGTCACCGTCACCTCCGCTGGCAATAACTCTAGGATCTTCATTGGAGGCGTTGAAATCACTCATCCGGACCTCTTCAACAATGGCCTCATCGTCGTTCATGGCCTTGACGGCTTTGTCACTCATCTTTCGCCTTATTCTTGCAACATCGAGAGAATGACATCTCTGTTACTTCCTCCTCAACCGTCTGAACGTCCGCAGTCAATTTCTTCGTTTTCTATCACCCGCCTGATGCTAAGAGACGCCATGCTTCGCTTGCGTATCAGCGGGTACGGTATACTCTCTCTCGCACTAGGAGTCAAGTACGCCGAGCTGGTCGCCCTCCAGAACATGACGGTGTTTGCCCTGGATGACGCGTCTATCTTCTCTGGAGGACACGAGTACATCCACAATGTGAGGTTCCATATCGTGCCGAACAGGATGTTGATGGCCGCGGATCTGGCGAAGCTGCCGGTGGCGACAGTGTTGCCGACTCTGTCCCAAGGTCAGCAGCTGATGGTGACTACTTCAGGGGGAGGGCCGACACCAATGATGATCAATTATGTCCGCATCAAAGCTACGGATGTGATAGACAATCTCAGAGTCGTGATTCATGCGTTGTACTCGCCATTCCCGCACCTTCAACGGGAGGTGACAGCCGCCGAAAACATCGGACGATCGGGATTCGTTGCGTCGGGATCCCAGGCTATGAGGAACGAGCCGTGTACAAAGATGGACGGGAATGATTGTGCAGCTGCAGCTGCACCTGCGGCGGTGATTAGACCGCCGTTTGAGATGGAAGATAAGGATGGTCTGTGA 1212 0.5305 MANLLQLTVLTFFFISTASAIDETSASSPDSSSLQPPPSPFPRDKDHPFSPTSLFSPILINLGFHDLAMAIHSVTDSTFTAWSGPTTIFAPTDASIRSCMSCSVPRLLKEHIVAGAFSFHYLRTLAFGTKIETMVPGRCVTVTSAGNNSRIFIGGVEITHPDLFNNGLIVVHGLDGFVTHLSPYSCNIERMTSLLLPPQPSERPQSISSFSITRLMLRDAMLRLRISGYGILSLALGVKYAELVALQNMTVFALDDASIFSGGHEYIHNVRFHIVPNRMLMAADLAKLPVATVLPTLSQGQQLMVTTSGGGPTPMMINYVRIKATDVIDNLRVVIHALYSPFPHLQREVTAAENIGRSGFVASGSQAMRNEPCTKMDGNDCAAAAAPAAVIRPPFEMEDKDGL* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0649 403 SUPERFAMILY FAS1 domain 58 176 IPR036378 -
Vvi1g0649 403 Gene3D FAS1 domain 44 179 IPR036378 -
Vvi1g0649 403 SMART fasc_3 250 345 IPR000782 -
Vvi1g0649 403 SMART fasc_3 87 181 IPR000782 -
Vvi1g0649 403 PANTHER OS02G0491300 PROTEIN-RELATED 7 346 - -
Vvi1g0649 403 MobiDBLite consensus disorder prediction 23 46 - -
Vvi1g0649 403 SUPERFAMILY FAS1 domain 244 339 IPR036378 -
Vvi1g0649 403 ProSiteProfiles FAS1/BIgH3 domain profile. 51 178 IPR000782 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0649 Vvi-Chr1 6469513 6470724 Dispersed/Tandem