Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0648 ATGGTGAGTCTTGTGCAAACCGCCATTCTGGTGTTATCATTCTTGGTCTCAACGGCCATGGCGGCTGAGGAAGCTTCATCTACGATTGCACCACCACCAACAATATTGTTTCAACAGCCTGGGGACCAACCATTCTCAGCAACATCTCTCCTCGCTCCCATCTTGATCAACCTTGGCTTCCAAGAATTCGCAATGGCTGTTCATGCTCTATCTGCCGCGCCCACCCTCAACACCTGGACTGGTCCTTCCACCATCTTTGCACTCACCGACTCCTCCATCCATTCCTGTCCTTCCTGCTCCATCCCTCGGCTCCTCCAGGAACACACTGTTCCAGGCCTCTTTTCCTCTCACCACCTGCGCAATTTAGCCTTTGGCACCAAGATCGAGACCAGCTTCCCTGGCCGATGCATCACCGTCACCTCCGCTTCCAACAACTCCAAGATCTTCATCGAAGGTGTTGAAATCACTCATCCGGATCTCTTCAACAACGGCTTCATACTCGTTCATGGCCTCGATGGCTTTGCATCTCACCTCTCTCCTTTCTCGTGCAATGTCGAGAGATTCGCCACTCTCTCCTTTTCGCCTCCTCAGCCCTCAGATTCTCCACAGGTACCTCCTCCATTTTCTGTGATCCGCCTGATGCTAAGTGACGCAATGCTTCGCTTGCGTATCAGTGGCTTTGGCATACTCGCTCTGGCAATGAGGGTGAAGTACTCCGAGCTCGTCCAACTCCAGAACATGACGGTGTTCGCACTCGATGATGCCACCATCTTCTCCGGTGGACGCGAGTATATCAGCAATGTGAGGTTTCACATTGTTCCGAACATGCTGCTGATGGCCGACGATCTGAATAAACTTCCGGTGCAGACGGTATTGCCAACGCTGGAACATGGCCAGACTCTGAAGGTGACCGACGGCGGAGGTGGATCAAATCCCATGAGGATCAATTACGTTCGGCTCAAGAGCCCTGATATTGTGCACAACCTCAAGATCGTGGTTCATAGCTTGTTCTTGCCGTTCCCGCACCTTCAACCCCGAGTCGAGGGAACCGAAGGGCTGGAATGGAATGCAGCAGGACCAGATGTGATGGAATCGAACGGTGAGATGGTTGATATGGACCCAACGCGGGAAATCATACCAACGGATGAGATCGAAATCGAAGATCATCACGGTCTATAA 1179 0.5225 MVSLVQTAILVLSFLVSTAMAAEEASSTIAPPPTILFQQPGDQPFSATSLLAPILINLGFQEFAMAVHALSAAPTLNTWTGPSTIFALTDSSIHSCPSCSIPRLLQEHTVPGLFSSHHLRNLAFGTKIETSFPGRCITVTSASNNSKIFIEGVEITHPDLFNNGFILVHGLDGFASHLSPFSCNVERFATLSFSPPQPSDSPQVPPPFSVIRLMLSDAMLRLRISGFGILALAMRVKYSELVQLQNMTVFALDDATIFSGGREYISNVRFHIVPNMLLMADDLNKLPVQTVLPTLEHGQTLKVTDGGGGSNPMRINYVRLKSPDIVHNLKIVVHSLFLPFPHLQPRVEGTEGLEWNAAGPDVMESNGEMVDMDPTREIIPTDEIEIEDHHGL* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0648 392 SUPERFAMILY FAS1 domain 237 334 IPR036378 -
Vvi1g0648 392 Gene3D FAS1 domain 37 175 IPR036378 -
Vvi1g0648 392 ProSiteProfiles FAS1/BIgH3 domain profile. 47 175 IPR000782 -
Vvi1g0648 392 PANTHER OS02G0491300 PROTEIN-RELATED 8 343 - -
Vvi1g0648 392 SUPERFAMILY FAS1 domain 51 173 IPR036378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0648 Vvi-Chr1 6467603 6468781 Dispersed/Proximal