Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0646 ATGGGTTCTCAGGAGGAGGAGGAGGTTAGATCGCTCTTGGAGACTGGACTTCTGCAGAATGAAAACAGCGATCTGCACACAGGAGATGGCTCAGTTGACATTCATGGGAAGCCTGTTCTGAGGAGCAACACTGGAAACTGGAGAGCATGTCCCTTCATTCTTGGTACTGAATGTTGTGAACGTTTAGCATACTATGGGATTGCAACTAATCTTGTTACTTACCTAACCAGCAAACTACATGAAGGAAATGTCTCTGCTGCAAGAAATGTTACCACTTGGCAAGGCACTTGCTACCTTACTCCCCTCATTGGGGCTGTCTTAGCAGATGCCTATTGTGGAAGATATTGGACAATCGCTGCTTTCTCCACAATATACTTCATCGGTATGTGTACATTGACTCTCTCAGCAACAGTTCCTGCATTCAAGCCTGCTGATTGTGTGGGTTCAGTATGCCCTCCGGCTACCACAGCTCAGTATGCAGTATTCTTCTTTGGGCTCTATCTGATTGCACTAGGAACTGGCGGGATCAAACCATGTGTTTCATCCTTTGGGGCGGATCAGTTTGATGATACTGACCCTAAAGAAAGGGTAAAGAAGGGTTCCTTCTTCAATTGGTTTTATTTTTCTATCAATATTGGTGCTCTTGTGTCAAGTAGTTTTCTTGTTTGGATTCAAGACAATGCTGGCTGGGGCCTAGGGTTTGGCATTCCTGCATTGTTTATGGGCATTGCTATTGCAAGTTTCTTTTCTGGTACACCACTCTATAGATTCCAAAAACCAGGGGGAAGCCCTATTACAAGAATGTGCCAGGTATTGGTTGCATCATTCCGCAAGTGGAAGCTAGAGGTCCCAAAAGATAGCAATCTCCTGTATGAAACACCGGACAAGAACTCTGCAATCGAAGGAAGTCGGAAACTGGAGCACAGCAATGAGCTAAAGTGCCTTGACAAAGCTGCTGTAATTTCAGATGCTGAAATCAAAAGTGGAGACTTCTCTAACCCCTGGAATCTCTGCACTGTCACACAGGTGGAAGAACTGAAGATCCTGATTCGTATGTTTCCAATCTGGGCTACTGGAATTGTCTTTTCTGCTGTTTATGCACAAATGTCTACCATGTTTGTGGAGCAGGGGATGGTCATGGACACAAACATTGGATCCTTCACCATTCCCCCTGCCTCTCTCTCCACTTTTGATGTCATCAGTGTCATTTTCTGGGTCCCTGTCTATGACAGGATCCTTGTACCAATTGCAAGGAAATTTACTGGTAAGGAAAGGGGCTTCTCGGAGTTACAGAGGATGGGAATTGGCCTCTTCCTTTCAGTCCTTTGCATGTCAGCTGCTGCTTTGGTAGAGATTAAGAGATTGCAGCTTGCAACAGCCCTTGATTTGGTTGATGAAGATGTTGCTGTACCACTTAGCATCTTATGGCAAATACCACAATATTTCTTGTTGGGTGCTGCAGAAGTATTTACATTCATTGGGCAGCTTGAGTTCTTCTATGACCAATCACCCGATGCCATGCGGAGCCTGTGTAGTGCATTGTCACTCTTAACAACTTCCTTGGGGAATTATCTTAGCGCATTTATTCTGACTGTTGTGACCACCTTGACAACTGAGGACGGGAAGACGGGATGGATTCCAGATAACCTGAATAAGGGCCATCTTGATTACTACTTCTGGCTCTTGGCTGGTCTCAGTTTCCTGAACTTGCTGGTGTACATGATTTGTGCAAAAATATATAAACGAAAGAAGGGCTCTTAG 1761 0.4486 MGSQEEEEVRSLLETGLLQNENSDLHTGDGSVDIHGKPVLRSNTGNWRACPFILGTECCERLAYYGIATNLVTYLTSKLHEGNVSAARNVTTWQGTCYLTPLIGAVLADAYCGRYWTIAAFSTIYFIGMCTLTLSATVPAFKPADCVGSVCPPATTAQYAVFFFGLYLIALGTGGIKPCVSSFGADQFDDTDPKERVKKGSFFNWFYFSINIGALVSSSFLVWIQDNAGWGLGFGIPALFMGIAIASFFSGTPLYRFQKPGGSPITRMCQVLVASFRKWKLEVPKDSNLLYETPDKNSAIEGSRKLEHSNELKCLDKAAVISDAEIKSGDFSNPWNLCTVTQVEELKILIRMFPIWATGIVFSAVYAQMSTMFVEQGMVMDTNIGSFTIPPASLSTFDVISVIFWVPVYDRILVPIARKFTGKERGFSELQRMGIGLFLSVLCMSAAALVEIKRLQLATALDLVDEDVAVPLSILWQIPQYFLLGAAEVFTFIGQLEFFYDQSPDAMRSLCSALSLLTTSLGNYLSAFILTVVTTLTTEDGKTGWIPDNLNKGHLDYYFWLLAGLSFLNLLVYMICAKIYKRKKGS* 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0646 586 Pfam POT family 115 546 IPR000109 GO:0016020|GO:0022857|GO:0055085
Vvi1g0646 586 SUPERFAMILY MFS general substrate transporter 40 583 IPR036259 -
Vvi1g0646 586 Gene3D MFS general substrate transporter like domains 18 586 IPR036259 -
Vvi1g0646 586 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 45 581 - -
Vvi1g0646 586 ProSitePatterns PTR2 family proton/oligopeptide symporters signature 2. 203 215 IPR018456 GO:0006857|GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0646 Vvi-Chr1 6449728 6457279 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g0646 1 586 Organic Solute Cotransporters AT2G02040 74.744 0.0 916