Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0641 ATGGCGACTCTCCTGCAACTCCCCATCCTCATTCTCATGTTCTCCTTCTTAATGTCTACTGCCATAGCCAACATTCTCTTTGAAGAAGCCTCAGCATCAACTTCAGCTCCGCAACATTCTCGACCTTCGCAACTGTTTCAACCAAACAAAGACGACCAATTCTATGGAGCATCTGTCTTCGGTCCCGTCTTGCACAGCCTTGGTTTCCAAGAACTCGCCATGGCTGTTCATTCTCTCTCCGCCTCATCTTCTTTCAACACTTGGACCGGTCCTTCCACCGTCTTCGCTCCCACCGACGCTTCAATCCGTAGCTGTTCTTCATGTTCGGTTACCAGACTTCTCCAGGAGCATACCGTGCCAGGTATTTTCTCTCTTCACTACCTGCAAACTCTGGCATTCGGAACCAAGATCGAGACGATGGTGCCTGGCCGGTGCCTCACGGTCACTTCTGCCGTCAACAACACTAAGATCTTCATCGGCGGAGTTGAAATTACTCATCCGGACCTCTTCAACAATGGCCTTATCGTAGTTCATGGCCTCGATGGCTTCGTTTCTCACCTTTCGCCATTCTCTTGCAACATTGAAAGAGTAAACTCTGTCTCCTTTCCTTTTCAGCCGTCTGATCGTTCCCACTCAGTTCCGTCCTTTGCTATTATGCGCCTCATGCTAAGGGACGCCATGGTCCGACTGCGCATGAACGGATTCAGCATACTCGCTCTCGCGCTCCGGCTTAAGTACCCTGAACTTGTAAGTCTCCAGAACATGACGGTATTCACTCTTGACGACGCCTCGATTTTCACTGGCGGCCAAGCGTACGTTAGCAACGTAAGGTTCCACATCGTGCCGAACCGCCTGTTGTTGGCTGCCGATCTGCAGAAACTGCCGGTGGCAACGTTGTTGCCTACGCTGGAACCTGACCAGAAGTTGAAAGTAACCACGGCTGGAGGCGGAGCAATGCCTATAAGGATCAATTACGTTCGGATCAAGAAACCCGATGTAATGCACAATCTTAAGATCGTGGTTCATGATTTGTACATGCCGTTCCCGCACCTTCATCAGGCAGAGGCCGTGGTCGACGGCATCGGACCATTGGGATTAGACGGGGCTGAAATGGAGATTCCGGTGAACAAATCTTGTTCAGTTGCAGGAACCGATGGAAGTGGTAGCTGTGCGGTGGTCCCCAATTCTGAGATAAAACCAACGGCTGAATTGGGAATGGAAGACCATCATGGCTTGTGA 1239 0.5085 MATLLQLPILILMFSFLMSTAIANILFEEASASTSAPQHSRPSQLFQPNKDDQFYGASVFGPVLHSLGFQELAMAVHSLSASSSFNTWTGPSTVFAPTDASIRSCSSCSVTRLLQEHTVPGIFSLHYLQTLAFGTKIETMVPGRCLTVTSAVNNTKIFIGGVEITHPDLFNNGLIVVHGLDGFVSHLSPFSCNIERVNSVSFPFQPSDRSHSVPSFAIMRLMLRDAMVRLRMNGFSILALALRLKYPELVSLQNMTVFTLDDASIFTGGQAYVSNVRFHIVPNRLLLAADLQKLPVATLLPTLEPDQKLKVTTAGGGAMPIRINYVRIKKPDVMHNLKIVVHDLYMPFPHLHQAEAVVDGIGPLGLDGAEMEIPVNKSCSVAGTDGSGSCAVVPNSEIKPTAELGMEDHHGL* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0641 412 SUPERFAMILY FAS1 domain 63 182 IPR036378 -
Vvi1g0641 412 PANTHER OS02G0491300 PROTEIN-RELATED 7 352 - -
Vvi1g0641 412 SUPERFAMILY FAS1 domain 233 342 IPR036378 -
Vvi1g0641 412 Gene3D FAS1 domain 40 185 IPR036378 -
Vvi1g0641 412 Pfam Fasciclin domain 69 181 IPR000782 -
Vvi1g0641 412 ProSiteProfiles FAS1/BIgH3 domain profile. 56 184 IPR000782 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0641 Vvi-Chr1 6411341 6412579 Dispersed/Proximal