Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0638 ATGACTTTGGGGATGTTTTATGCTGCAGTTGCTAAGACAGCTTTTAAGGGTGATGGTCAACAAAGCTTGCATCATTTTTGGGAGATGGTTGCTTATATTGCTAATACATTAATTTTCATCTTGAGCGGAGTTGTTATAGCAGAAGGTGTTCTGGGAAGCAATGATATTTTCAAAAACCATGGAAATTCATGGGGCTACCTCATTCTTCTTTATGTTTATGTCCAAGTCTCTCGGATTGTAGTTGTTGGAGTCTCATATCCCTTTCTGTGGTATTTTGGCTATGGCCTGGATTGGAAGGAAGCTATTATCCTCATATGGTCAGGCTTGCGAGGAGCTGTGGCATTGTCACTTTCACTGTCAGTTAAGCGTGCTAGTGACAGTTCATCATATCTCAGTTCAGAAACAGGAACACTGTTTGTTTTCTTCACTGGTGGAATTGTATTCCTGACACTTATTGTGAATGGCTCAACCACACAATTTATTTTACATCTTCTCAACATGGATAAGCTATCAGAAGTAAAGAGGCGCATATTGGACTATACAAAATATGAAATGTTGAACAAAGCATTGGAGGCCTTTGGTGATCTTGGAGATGATGAGGAACTAGGACCTGCTGACTGGCCCACAGTCAAAAGATATATTGCAAGCTTAAATGATGTAGAAGGGGGACTTGTACACCCTCATACTGTATATGAAAGTGATAATAATCTGTACCCTACAAATTTGAAAGATATACGCATACGCCTTTTGAATGGTGTTCAAGCTGCGTACTGGAGGATGCTTGATGAGGGGAGGATAACACAAACTACTGCAAATCTTTTGATGCAATCAGTGGATGAAGCACTCGACTTGGTTTCTGATGAACCTTTATGTGACTGGAAAGGTTTAAAAGCTAATGTTAATTTCCCAAATTATTACAGATTCCTTCAAACAAGCATCTGTCCACAAAAGCTTATTACATATTTCACGGTGGAAAGGTTGGAATCTGCATGTTACATCTGTGCTGCATTTTTACGTGCCCACAGAATTGCACGACGTCAACTACTTGACTTCATTGGTGATAGTGAAATTGCATCTACTGTCATTAATGAAAGTGAAGCAGAAGGAGAAGAAGCAAGAAAGTTCCTGGAAGATGTCCGTGTTACATTTCCTCAGGTTTTGCGTGTTGTGAAAACCAGGCAAGTAACTCATTCAGTGCTGCTACATTTAATTGATTATGTGCAAAATCTTGAGAAAATTGGATTGTTGGAAGAAAAGGAGATGTTCCATCTTCATGATGCTGTCCAGACAGACTTAAAAAAGCTTTTAAGAAATCCTCCTTTGGTAAAGATTCCAAGAATGCGTGATATGATTACAACCCATCCTTTGTTGGGGGCCCTTCCTTCTGCAGTCCGTGAACCACTTGAAAGTTCTACCAAGGAAATAATGAAAGTACGTGGTGTGGCACTTTACAGAGAGGGTTCAAAGCCAAGTGGTATCTGGCTCATATCTAGTGGAGTGGTCAAGTGGGCGAGTAAGAGCATAAGAAACAAGCACTCATTGCGTCCAACATTTACGCATGGGAGTACTTTGGGACTATATGAAGTGCTAATTGGAAAGCCTTATATATGTGACATGATAACAGATTCAGTGGTACTATGTTTTTTTGTTGAGACTGATAAAATAATGTCAATGCTCAGGTCAGATCCTGCAGTAGAAGATTTCCTGTGGCAGGAAAGTGCTATAGTTCTTGCAAAACTCTTGCTTCCTCAAATATTTGAGAAAATGGCAATGCAAGATTTGAGAGCCCTTGTTGCAGAAAAGTCAATAATGACCATATATATAAGTGGAGAAACTATAGAAATACCTCACTATTCCATTGGTTTTTTATTAGACGGATTCATAAAAGGCCAAGAAGAACTGATTACATATCCCGCTGCACTGATGCCTTCCCATAATCTCAGTTTCCGAAGTCTAGATACATCAGGTGCCAAGGTAGCTGGTTCTTCTCATCAAGGATCTCCGTATCAAGTTCAGACGAGAGCAAGAGTAATCATTTTCGACATTTCAGCATTTGAAGCAGACCGTGGTCTTCAAAGAAGGTCATCCTCATTGGTTCCTCATTCAGCCGATCAACCTTCAAGATCTCTCAGTAGAGAACATGGTGATCTTATGAGTTGGCCTGAACATTTCTACAAGCTAAGGCAAGACAATCAGAGCACTGAAGGGGACCGTTGGAAATCGAACAGCTTGTCTTATAAGGCAATGCAACTAAGCATTTTTGGCAGCATGGTTGGAACGCATCAGCACATTAGAAGTTTTCAAAGCAGTCGAGTTAAGCCATCACACAGCCTGTCATACCCAAGAGTGCCAACAACTCATGCCCCCCCACTTGTATCTGTCAGATCAGAAGGGCCTGCTACTGCGAGGAGAGGCATTGATATGGGAAAGTTAACAGGACAAAATCTGAAGCCCCCACTCCAAGGTACACCACACACAAAAGAGACTCATGAAGTAGATGATTCGAGTGAGGAGTCAGGAGTTGAGGATGAACTCCTTGTGAGAATTGATTCACCGAGCAAGCTTTCTTTTCATCAGGCTCCTTGA 2586 0.4107 MTLGMFYAAVAKTAFKGDGQQSLHHFWEMVAYIANTLIFILSGVVIAEGVLGSNDIFKNHGNSWGYLILLYVYVQVSRIVVVGVSYPFLWYFGYGLDWKEAIILIWSGLRGAVALSLSLSVKRASDSSSYLSSETGTLFVFFTGGIVFLTLIVNGSTTQFILHLLNMDKLSEVKRRILDYTKYEMLNKALEAFGDLGDDEELGPADWPTVKRYIASLNDVEGGLVHPHTVYESDNNLYPTNLKDIRIRLLNGVQAAYWRMLDEGRITQTTANLLMQSVDEALDLVSDEPLCDWKGLKANVNFPNYYRFLQTSICPQKLITYFTVERLESACYICAAFLRAHRIARRQLLDFIGDSEIASTVINESEAEGEEARKFLEDVRVTFPQVLRVVKTRQVTHSVLLHLIDYVQNLEKIGLLEEKEMFHLHDAVQTDLKKLLRNPPLVKIPRMRDMITTHPLLGALPSAVREPLESSTKEIMKVRGVALYREGSKPSGIWLISSGVVKWASKSIRNKHSLRPTFTHGSTLGLYEVLIGKPYICDMITDSVVLCFFVETDKIMSMLRSDPAVEDFLWQESAIVLAKLLLPQIFEKMAMQDLRALVAEKSIMTIYISGETIEIPHYSIGFLLDGFIKGQEELITYPAALMPSHNLSFRSLDTSGAKVAGSSHQGSPYQVQTRARVIIFDISAFEADRGLQRRSSSLVPHSADQPSRSLSREHGDLMSWPEHFYKLRQDNQSTEGDRWKSNSLSYKAMQLSIFGSMVGTHQHIRSFQSSRVKPSHSLSYPRVPTTHAPPLVSVRSEGPATARRGIDMGKLTGQNLKPPLQGTPHTKETHEVDDSSEESGVEDELLVRIDSPSKLSFHQAP* 862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0638 861 ProSiteProfiles cAMP/cGMP binding motif profile. 456 559 IPR000595 -
Vvi1g0638 861 SUPERFAMILY cAMP-binding domain-like 433 570 IPR018490 -
Vvi1g0638 861 MobiDBLite consensus disorder prediction 765 861 - -
Vvi1g0638 861 FunFam Sodium/hydrogen exchanger 7 443 580 - -
Vvi1g0638 861 Gene3D Jelly Rolls 417 582 IPR014710 -
Vvi1g0638 861 MobiDBLite consensus disorder prediction 694 713 - -
Vvi1g0638 861 PANTHER SODIUM/HYDROGEN EXCHANGER 1 531 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Vvi1g0638 861 MobiDBLite consensus disorder prediction 765 782 - -
Vvi1g0638 861 Pfam Sodium/hydrogen exchanger family 3 162 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g0638 1 859 Antiporters AT2G01980 63.647 0.0 1052