Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0637 ATGCTTCCAGTCATCGCTACAAAGCTGGAGAGGCCGTTCCGCTCTACGCCAACAAGCGAAACCTACCGGTATTTCGATCTTCCATTCTGCGTGCCAGCTCATCTTAAAGAGAAGAAAGAAGCTCTTGGTGAGGTGTTGAATGGAGATCGTCTTGTCAGTGCTCCATACAAACTTGACTTCCTAAGAGAGAAAGACTCTGAAGTTGTTTGCAAAAAGAAGCTTAAAAAAGAAGAAGTTGCTCAGTTCCGAGCTGCAGTTGCTAAGGACTATTACTTCCAAATGTACTATGATGACTTGCCAATATGGGGTTTTATTGGAAAGGTTGACAAGGAGGGCAAAGCTGACCCAAGCGAGTACAAGTATTTCTTGTACAAGCACATTCAATTTGATATTCGTTATAACAAGGATCGTGTGATTGAGATCAACGCCCGAACCGACCCTCATTCTATGGTTGACGTGACAGATGATAAGGATGTTGATGTGGAGTTCATGTACACTGTCAAATGGACAGAAACTGATGCTCCTTTTGAGAAGAGGATGGAGAAGTACTCTCAAACTTCTTCAATGCCACATCACTTGGAGATTCATTGGTTCTCAATTATAAACTCTTGCGTGACAGTACTCCTCTTAACCGGGTTTCTTGCGACGATTCTCATGCGAGTCCTTAAGAATGATTTTATTAAGTATGCTCATGATGAAGAATCAGCCGATGACCAAGAAGAAACTGGATGGAAGTACATTCATGGTGATGTATTCCGGTACCCAAAGTACAAATCCTTGTTTGCTGCTGCTCTTGGATCTGGCACCCAGTTATTTACACTTACGGTGTTCATTTTTATACTTGCATTAGTGGGTGTATTTTATCCATACAACCGAGGAGCACTTTTCACTGCACTGGTGGTCATCTATGCTCTTACATCTGGCATAGCAGGATACACAGCAACTTCTTTCTATTGTCAGCTTGAAGGAACCAACTGGGTTAGGAATCTGCTGCTGACAGGATGCCTTTTCTGTGCTCCTCTGTTCCTTACATTCTGCTTCCTTAACACTGTTGCAATTATTTACAGTGCAACTGCAGCACTCCCCTTTGGCACAATTGTGGTAATTGTCCTTATATGGACATTAGTGACATCACCATTGCTTGTGTTGGGTGGGATTGCTGGGAAAAATAGCAAGGCCGAATTCCAAGCTCCTTGCCGCACTACAAAGTATCCCCGAGAGATTCCGGCACTGCCTTGGTACAGGAGCACTATTCCTCAGATGGCAATGGCAGGGTTTTTGCCTTTTAGTGCCATCTACATTGAGCTTTACTACATATTTGCTAGTGTATGGGGTCACAGGATCTACACCATATACAGCATCCTGTTTATCGTCTTCATTATTCTTCTGATAGTCACAGCTTTTATTACTGTGGCTCTGACATACTTTCAACTTGCTGCTGAAGATCATGAATGGTGGTGGAGGTCTTTTCTTTGTGGTGGATCAACAGGCTTGTTTATCTATGGCTACTGCTTGTATTATTACTATGCACGGTCAGATATGTCAGGTTTCATGCAAACTTCGTTCTTCTTTGGGTATATGGCTTGCATCTGCTATGGCTTCTTCCTCATGCTTGGAACTGTAGGTTTTCGTGCATCATTGCTCTTTGTTCGTCATATATACAGGTCTATCAAGTGTGAGTAG 1683 0.429 MLPVIATKLERPFRSTPTSETYRYFDLPFCVPAHLKEKKEALGEVLNGDRLVSAPYKLDFLREKDSEVVCKKKLKKEEVAQFRAAVAKDYYFQMYYDDLPIWGFIGKVDKEGKADPSEYKYFLYKHIQFDIRYNKDRVIEINARTDPHSMVDVTDDKDVDVEFMYTVKWTETDAPFEKRMEKYSQTSSMPHHLEIHWFSIINSCVTVLLLTGFLATILMRVLKNDFIKYAHDEESADDQEETGWKYIHGDVFRYPKYKSLFAAALGSGTQLFTLTVFIFILALVGVFYPYNRGALFTALVVIYALTSGIAGYTATSFYCQLEGTNWVRNLLLTGCLFCAPLFLTFCFLNTVAIIYSATAALPFGTIVVIVLIWTLVTSPLLVLGGIAGKNSKAEFQAPCRTTKYPREIPALPWYRSTIPQMAMAGFLPFSAIYIELYYIFASVWGHRIYTIYSILFIVFIILLIVTAFITVALTYFQLAAEDHEWWWRSFLCGGSTGLFIYGYCLYYYYARSDMSGFMQTSFFFGYMACICYGFFLMLGTVGFRASLLFVRHIYRSIKCE* 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0637 560 PANTHER TRANSMEMBRANE 9 SUPERFAMILY PROTEIN 15 560 IPR004240 GO:0016020
Vvi1g0637 560 Pfam Endomembrane protein 70 21 517 IPR004240 GO:0016020
Vvi1g0637 560 SUPERFAMILY MFS general substrate transporter 195 377 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0637 Vvi-Chr1 6319642 6324996 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g0637 2 560 Miscellaneous Gene Families AT2G01970 87.835 0.0 1000