Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0633 ATGGCAAAGTCACCTCAAGTGAGTCTTGGAGCTTGTGGACTCACCATGCCGGTACTTGGCATGGGAACTTCTTCCTGGCCTCCGGCCGACCCAGAAACGGCCAAGTTGGCAATTATCGAAGCCATCAAAGCCGGTTACCGCCACTTTGATACGGCATTCGCCTATGGATCCGAGCAGCCTCTGGGCCAAGCCATAGCTGAAGCTCTGCGCCTCGGTCTCATCAAGTCCAGGGATGATCTGTTCATCACCTCTAAACTATGGAGCAGCTATACTGACCGTGATCAAGTTGTGCCTGCAATCAAGATGAGTCTCCGGAACCTTCAATTGGACTACCTCGACATGTATCTGATACATTTGCCATTGAAACTGAGCCAAGAGATCCGTAAAACCCCAGTTCCAAAAGAGATATTAATGCCCTTGGACATCAAGTCAGTATGGGAAGGCATGGAAGAGTGTCAGAGACTGGGCCTCACTAAAGCCATTGGTGTCAGTAATTTCTCTCCTAGAATGCTCGAGGAGACACTGGCAATTGCCGAAATTCCTCCAGCAGTCAATCAAGTGGAGATGAACCCGCTTTGGCAGCAGAAGAAGCTACGAGAGCACTGCAACGCAAAGGGCATCCATATTACTGCTTACTCTCCTTTGGGTGCGAATGGGACCAAATGGGGAGACAACAGAATTGTGGAGTGTGATGTCCTGGAAGATATCGCCAAGGCTAGGGGAAAAACAACTGCTCAGGTGTCCATGAGATGGGTGTATGAACAAGGCGTGAGTATAGTAGCCAAGAGCTTCAACAAGGAGAGAATGAAACAGAACCTTGAGATATTCGATTGGTCATTGACGGAGGAAGAGTTGGAGAGGATCAGTCAGCTTCCTCAGCGCAAAGGATTTCTAATTTCTTCCATCCTTGGGGCCCATGATTTCACACTGCAGCTTGACGATGAGATTTGA 951 0.49 MAKSPQVSLGACGLTMPVLGMGTSSWPPADPETAKLAIIEAIKAGYRHFDTAFAYGSEQPLGQAIAEALRLGLIKSRDDLFITSKLWSSYTDRDQVVPAIKMSLRNLQLDYLDMYLIHLPLKLSQEIRKTPVPKEILMPLDIKSVWEGMEECQRLGLTKAIGVSNFSPRMLEETLAIAEIPPAVNQVEMNPLWQQKKLREHCNAKGIHITAYSPLGANGTKWGDNRIVECDVLEDIAKARGKTTAQVSMRWVYEQGVSIVAKSFNKERMKQNLEIFDWSLTEEELERISQLPQRKGFLISSILGAHDFTLQLDDEI* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0633 316 Gene3D - 3 309 IPR036812 -
Vvi1g0633 316 CDD AKR_AKR4A_4B 12 293 IPR044497 GO:0016616
Vvi1g0633 316 PANTHER ALDO/KETO REDUCTASE 13 293 - -
Vvi1g0633 316 ProSitePatterns Aldo/keto reductase family putative active site signature. 260 275 IPR018170 GO:0016491
Vvi1g0633 316 PIRSF AKR 1 313 IPR020471 GO:0016491
Vvi1g0633 316 ProSitePatterns Aldo/keto reductase family signature 1. 45 62 IPR018170 GO:0016491
Vvi1g0633 316 ProSitePatterns Aldo/keto reductase family signature 2. 149 166 IPR018170 GO:0016491
Vvi1g0633 316 SUPERFAMILY NAD(P)-linked oxidoreductase 7 298 IPR036812 -
Vvi1g0633 316 FunFam NAD(P)-linked oxidoreductase superfamily protein 6 307 - -
Vvi1g0633 316 Pfam Aldo/keto reductase family 19 290 IPR023210 -
Vvi1g0633 316 PRINTS Aldo-keto reductase signature 102 120 IPR020471 GO:0016491
Vvi1g0633 316 PRINTS Aldo-keto reductase signature 149 166 IPR020471 GO:0016491
Vvi1g0633 316 PRINTS Aldo-keto reductase signature 227 251 IPR020471 GO:0016491
Vvi1g0633 316 PRINTS Aldo-keto reductase signature 183 212 IPR020471 GO:0016491
Vvi1g0633 316 PRINTS Aldo-keto reductase signature 41 65 IPR020471 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0633 Vvi-Chr1 6289289 6290657 Dispersed/Tandem