Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0630 ATGAAGGAAAGAAAAGAAGAAAACCTGAAAAAGACGGGAACGGATGATCCCTTTTACAATCAAAATGGAAAAGAAAAGAAAAAGAAGAAGAAAACACGAAAGGATCGCCTTAAAACCACGCCACCAAAAAACCAAAAAAAACAAGTGGTTAAGACCCACGACATGAATGAAGATAAAATGAAGTGGGTCTCATTTCAATTGGCTCCTTTTCATCAGAGCGCAGAAACTGAAATTTTCTTTATTGTGGAAATCGCTCATGGAGTCAAAAGTCAAGCAGAAAATAATGAACCAACCCCATACCCTAAAGCCATTGTTTTGTGGATTCTAGCCCATATCTATTGGCCTACAAGGAGCTCTGGGTTTCGCACAAGACAGAGCAGAGCAAAGATGAGAAGCATTCCAGAAATGGCATTAGGATCCACAGGAAAGGCCATCCCTCTTGTGGGCATGGGCACAGCTGTGTATCCTTTTGCTCCATCAGAAACCATGATAGATTCCATTCTCACTGCAATAGAGTTAGGTTATAGACACTTCGACTCTGCTGCTCTGTACCAGTCAGAGAAACCTCTTGGTGAAGCAATAAAGAAAGCAGTGGAGCTGGGGCTCATTAAATCGAGAGATGAGCTTTTTATCACCTCCAAGCTTTGGTGCAGCGATGCACACCATGACCGCGTCCTCCCTGCACTACAAAACACACTCAAGAATCTTCAACTGGACTATCTTGATCTCTATCTCATTCATTGGCCGGTAAGCCTGAAGCCTGGGAAATATGAGTTGCCTGTGAATAAGGATGACCTTCTTCCTATTGACTTGGGGTCTGTTTGGAAAGCCATGGAAGATTGTCAGAAGCTCGGCCTCACAAAAGCCATAGGTGTAAGCAACTTCTCGTGCAAAAAGCTGGAGGAGTTGCTCCAGACAGCTAGCATCCTTCCGGCAGTCAATCAAGTGGAAATGAACCCACTTTGGCAGCAGAAGAAGCTCAGGGAGTTCTGTGCGGAAAAAGGTATCCATATCACGGCATACTCCCCCTTGGGTGCCAAAGGAACACTGTGGGGAACTGATCGAGTTATGGAATGTGAGGTGCTCAAAGAAATTGCCAGAGAAACAGGAAAATCAATTGCCCAGGTTTGTTTGAGATGGGTTTATGAGGAAGGGGTGAGCCTTCTTGTGAAGAGCTTCAACAAGGAGAGGATGAAACAGAATCTGGAGATATTTGATTGGGAACTGAGCGCCCAGGACCTGGAGAAGATCATTCAAATTCCCCAATTTAAGGGGTTTCCTGGTGTGGAATTTGTTTGCCAAACAGGCCCTTACAAGTCTCTTGTGGATCTTTGGGATGGGGAGATCTAG 1350 0.4474 MKERKEENLKKTGTDDPFYNQNGKEKKKKKKTRKDRLKTTPPKNQKKQVVKTHDMNEDKMKWVSFQLAPFHQSAETEIFFIVEIAHGVKSQAENNEPTPYPKAIVLWILAHIYWPTRSSGFRTRQSRAKMRSIPEMALGSTGKAIPLVGMGTAVYPFAPSETMIDSILTAIELGYRHFDSAALYQSEKPLGEAIKKAVELGLIKSRDELFITSKLWCSDAHHDRVLPALQNTLKNLQLDYLDLYLIHWPVSLKPGKYELPVNKDDLLPIDLGSVWKAMEDCQKLGLTKAIGVSNFSCKKLEELLQTASILPAVNQVEMNPLWQQKKLREFCAEKGIHITAYSPLGAKGTLWGTDRVMECEVLKEIARETGKSIAQVCLRWVYEEGVSLLVKSFNKERMKQNLEIFDWELSAQDLEKIIQIPQFKGFPGVEFVCQTGPYKSLVDLWDGEI* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0630 449 PRINTS Aldo-keto reductase signature 312 341 IPR020471 GO:0016491
Vvi1g0630 449 PRINTS Aldo-keto reductase signature 356 380 IPR020471 GO:0016491
Vvi1g0630 449 PRINTS Aldo-keto reductase signature 170 194 IPR020471 GO:0016491
Vvi1g0630 449 PRINTS Aldo-keto reductase signature 231 249 IPR020471 GO:0016491
Vvi1g0630 449 PRINTS Aldo-keto reductase signature 278 295 IPR020471 GO:0016491
Vvi1g0630 449 ProSitePatterns Aldo/keto reductase family putative active site signature. 389 404 IPR018170 GO:0016491
Vvi1g0630 449 CDD AKR_AKR4A_4B 141 422 IPR044497 GO:0016616
Vvi1g0630 449 PANTHER ALDO/KETO REDUCTASE 140 422 - -
Vvi1g0630 449 Pfam Aldo/keto reductase family 149 417 IPR023210 -
Vvi1g0630 449 MobiDBLite consensus disorder prediction 1 51 - -
Vvi1g0630 449 Gene3D - 132 426 IPR036812 -
Vvi1g0630 449 ProSitePatterns Aldo/keto reductase family signature 2. 278 295 IPR018170 GO:0016491
Vvi1g0630 449 SUPERFAMILY NAD(P)-linked oxidoreductase 136 436 IPR036812 -
Vvi1g0630 449 ProSitePatterns Aldo/keto reductase family signature 1. 174 191 IPR018170 GO:0016491
Vvi1g0630 449 FunFam NAD(P)-linked oxidoreductase superfamily protein 135 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0630 Vvi-Chr1 6274584 6278504 Dispersed/Tandem