Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0627 ATGCTTTCTACCAAGGTCGTCCCAAAAGGGTTTCTAGCCGTGTGCGTGGGAAAGGAGTTGAAAAGGTTCATCATCCTGATAGAGTATATAGGTCACCAGGCATTTGGGCTTCTGTTGAGGGAAGCTGAAGAAGAATTCGGGTTTCAGCAGGAGGGTGTGCTCAAGATCCCATGTGAAGTGGTTGTGTTTGAGAGGATCTTGAAGGTGGTGGAAGAAAAGAAAGTTGTGTTCTTCTTGCATGAGTTTGGATTGAATGTAGAGAAGGAGATGATCGATTGTTGCTCATCCTCAGATTGTGAGTTCACACATTCTCACCATCCTCAAATGTGTAGGTGA 336 0.4494 MLSTKVVPKGFLAVCVGKELKRFIILIEYIGHQAFGLLLREAEEEFGFQQEGVLKIPCEVVVFERILKVVEEKKVVFFLHEFGLNVEKEMIDCCSSSDCEFTHSHHPQMCR* 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0627 111 Pfam Auxin responsive protein 4 69 IPR003676 GO:0009733
Vvi1g0627 111 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 7 66 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0627 Vvi-Chr1 6254753 6255088 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g0627 3 111 Calmodulin-binding Proteins AT4G31320 53.509 9.29e-35 116