Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0626 ATGGCTAGCATTCCACGAGTGCCGATTGGCTCGTCTACGCTACCTCTTCTGGGCTTTGGGACGGCCGTATTTCCGTTTGCTGCATCAGAAACCATGAAAGAATCCATTCTCCATGCCATCAAACTGGGCTACAGACACATCGACGCCGCTTCTGTTTACAACTCGGAGCAGCCCCTGGGTGAAGCCATTACCGAAGCCTTAGGCCTTGGCCTAATCAAATCAAGGGAAGAGCTATTCGTCACCTCAAAGCTTTGGTGCTCCGATGCCCATCCTCACCTAGTCCTCCCTGCACTCAGCAAAACTCTCAAGAATCTTGGGTTGGAATACCTTGATCTCTACCTCGTTCATTTTCCGGTGAGCTTGAAGCCAGGGAGTTATGTGGTTCCTTTCGATAAAACGGAGCTGCTTCCCATGGATTTCAAGTCCGTCTGGGAAGCCATGGAGGTATGTCATAGCCTCGGCCTCGCAAAATCCATAGGAGTAAGCAACTTCTCTTGCAAGAAGCTTCAGGACTTGCTCGCCACCGCTAAGATTCCTCCGGCTGTCAATCAGGTGGAGATGAGTCCGCGATGGCAGCAGAAGAAGCTGAGGGAGTTCTGCAAGGGAAAGAATATCCATGTGACAGCATACTCTCCTTTAGGGGGCAGAGGAACTGTGTGGGGAACTAACGAAGTCCTTGGTTCTAAGATTCTGCAAGAGATTGCTCAGGCGAAAGGAAAAACAGTTGCTCAGATTTGTTTGAGGTGGGTTTTGGAGCAAGGAGCGAGTGTTGTTGTGAAGAGCTTTAACGAGGAGAGGATAAAAGAAAACATGGAGATATTGGACTGGGAATTAAGCTCTGAAGAGTCCCAAAAGATTGATCAACTTGAACAGCAGAAAGGGTTTCCGGGGGACATGTTTGTGTGGGAGGAAGGCCCCTACAAATCTATAGAGGAGTTTTGGGACGGAGAAATCTAG 957 0.4922 MASIPRVPIGSSTLPLLGFGTAVFPFAASETMKESILHAIKLGYRHIDAASVYNSEQPLGEAITEALGLGLIKSREELFVTSKLWCSDAHPHLVLPALSKTLKNLGLEYLDLYLVHFPVSLKPGSYVVPFDKTELLPMDFKSVWEAMEVCHSLGLAKSIGVSNFSCKKLQDLLATAKIPPAVNQVEMSPRWQQKKLREFCKGKNIHVTAYSPLGGRGTVWGTNEVLGSKILQEIAQAKGKTVAQICLRWVLEQGASVVVKSFNEERIKENMEILDWELSSEESQKIDQLEQQKGFPGDMFVWEEGPYKSIEEFWDGEI* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0626 318 SUPERFAMILY NAD(P)-linked oxidoreductase 13 302 IPR036812 -
Vvi1g0626 318 PIRSF AKR 9 313 IPR020471 GO:0016491
Vvi1g0626 318 ProSitePatterns Aldo/keto reductase family putative active site signature. 258 273 IPR018170 GO:0016491
Vvi1g0626 318 PRINTS Aldo-keto reductase signature 39 63 IPR020471 GO:0016491
Vvi1g0626 318 PRINTS Aldo-keto reductase signature 147 164 IPR020471 GO:0016491
Vvi1g0626 318 PRINTS Aldo-keto reductase signature 181 210 IPR020471 GO:0016491
Vvi1g0626 318 PRINTS Aldo-keto reductase signature 225 249 IPR020471 GO:0016491
Vvi1g0626 318 PRINTS Aldo-keto reductase signature 100 118 IPR020471 GO:0016491
Vvi1g0626 318 Pfam Aldo/keto reductase family 17 290 IPR023210 -
Vvi1g0626 318 ProSitePatterns Aldo/keto reductase family signature 1. 43 60 IPR018170 GO:0016491
Vvi1g0626 318 CDD AKR_AKR4A_4B 13 291 IPR044497 GO:0016616
Vvi1g0626 318 ProSitePatterns Aldo/keto reductase family signature 2. 147 164 IPR018170 GO:0016491
Vvi1g0626 318 Gene3D - 11 318 IPR036812 -
Vvi1g0626 318 PANTHER ALDO/KETO REDUCTASE 12 291 - -
Vvi1g0626 318 FunFam NAD(P)-linked oxidoreductase superfamily protein 7 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0626 Vvi-Chr1 6249032 6252177 Tandem