Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0625 ATGTTGATAGTGAATAATCCCAATGATAATAGTTTGTTATCGACATTGGAATTAAGTAGATCAAAGAAAATGGCTGATATTGCCGGCAAGCCGGTGGGCTCAGGCCATGCTAGAATTCCACTCTTGGGTTTTGGAACTGCTGTATTTCCTTTCACTGCATCAGAAACCATGAAAGAATCCATTCTCCATGCCATCAAACTGGGCTACAGACACATCGACGCCGCTGCTATTTACAACTCGGAGCCTCCCGTGGGTGAAGCGATTGCGGAAGCTTTAGGCCTTGGCCTGATCAAATCAAGGGCGGAGCTATTCATCACGTCAAAGCTTTGGTGCACCGACGCACACCCTGACCTAGTCCTCCCTGCACTACGCAGAACTCTCAAGAATCTTGGGTTGGAATACCTTGATCTGTACCTCATACATTTCCCGGTGAGCTTGAAGCCTGGGAGTTGTGAGGTGCCCTTTGAAGAGAAGGATCTTCTTCCTCTGGATTTCAAGTCTGTTTGGGAAGCCATGGAGGAGTGTCAAAGCCTCGGTCTATCAAAATTGATAGGAGTAAGCAACTTTTCTTGCAAGAAGCTGCAGGACCTGCTGGTCACTGCAAAGATTTCACCCGCTGTCAATCAAGTGGAGATGAATCCACTATGGCAGCAGAAGAAGCTGAGGGAGTTCTGTAATGGCAAGGGCATCCATGTCACAGCCTACTCCCCATTAGGTGGCAGAGGAACTCTTTGGGGAACTAACCGAGTCCTTGACTGTAAGGTGCTGCAAGAGATTGCTCAGGCGAAAGGAAAGACAGTAGCTCAGATATGTTTGAGGTGGGCTTTGGAGCAAGATGTGAGTATTCTGGTGAAGAGCTTCAACAAGGAGAGGATAGAAGAGAACCTTGAGATATTGGATTGGAAGTTGAGCCCGGAAGAGTCCCAAAAGATCGATGATATTGAACAGCAAAGAGGGTTTCTTGCACCTATGTTCGTATCAGAACATGGTCCTTACAAATCCCTCGAGGACTTCTGGGACGGAGAACTTTAG 1032 0.4738 MLIVNNPNDNSLLSTLELSRSKKMADIAGKPVGSGHARIPLLGFGTAVFPFTASETMKESILHAIKLGYRHIDAAAIYNSEPPVGEAIAEALGLGLIKSRAELFITSKLWCTDAHPDLVLPALRRTLKNLGLEYLDLYLIHFPVSLKPGSCEVPFEEKDLLPLDFKSVWEAMEECQSLGLSKLIGVSNFSCKKLQDLLVTAKISPAVNQVEMNPLWQQKKLREFCNGKGIHVTAYSPLGGRGTLWGTNRVLDCKVLQEIAQAKGKTVAQICLRWALEQDVSILVKSFNKERIEENLEILDWKLSPEESQKIDDIEQQRGFLAPMFVSEHGPYKSLEDFWDGEL* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0625 343 FunFam NAD(P)-linked oxidoreductase superfamily protein 30 330 - -
Vvi1g0625 343 ProSitePatterns Aldo/keto reductase family signature 1. 68 85 IPR018170 GO:0016491
Vvi1g0625 343 ProSitePatterns Aldo/keto reductase family signature 2. 172 189 IPR018170 GO:0016491
Vvi1g0625 343 Gene3D - 30 326 IPR036812 -
Vvi1g0625 343 CDD AKR_AKR4A_4B 34 316 IPR044497 GO:0016616
Vvi1g0625 343 PRINTS Aldo-keto reductase signature 206 235 IPR020471 GO:0016491
Vvi1g0625 343 PRINTS Aldo-keto reductase signature 172 189 IPR020471 GO:0016491
Vvi1g0625 343 PRINTS Aldo-keto reductase signature 250 274 IPR020471 GO:0016491
Vvi1g0625 343 PRINTS Aldo-keto reductase signature 64 88 IPR020471 GO:0016491
Vvi1g0625 343 PRINTS Aldo-keto reductase signature 125 143 IPR020471 GO:0016491
Vvi1g0625 343 ProSitePatterns Aldo/keto reductase family putative active site signature. 283 298 IPR018170 GO:0016491
Vvi1g0625 343 Pfam Aldo/keto reductase family 42 315 IPR023210 -
Vvi1g0625 343 PIRSF AKR 33 338 IPR020471 GO:0016491
Vvi1g0625 343 PANTHER ALDO/KETO REDUCTASE 37 316 - -
Vvi1g0625 343 SUPERFAMILY NAD(P)-linked oxidoreductase 32 331 IPR036812 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0625 Vvi-Chr1 6241165 6248273 Tandem