Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0526 ATGGAAGCGCTCTCTAAAGGGAGCTTAAAAATGCGTGAGCTTCGGAGGTCCTCATCACTAATGTGCGGCCCAAACGGAACCCAAACCCCACCCTATTTCTCTCGTTGGGAAGCAATGGTGATGTTCAAGGTTTCTCGAGTCACAACTTCGCCGTTTGATGGCCAGAAACCGGGAACTTCTGGCCTCAGGAAGAAGGTGAAAGTATTCAAGCAACAAAATTACTTGCACAATTTTGTTCAGTCAACATTCAATGCCCTTTCACAAGACAAAATAAGAGGCATGACACTTGTTGTTTCTGGTGATGGCCGCTATTTCTCGAAGGATGCCATTCAGATTATAATTAAGATGGCAGCTGCAAATGGAGTGAGATCTGTCTGGGTTGGTCAAAATGGGTTGCTTTCAACTCCTGCTGTATCAGCTGTCATCCGTGAAAGAGTGGGGAAAGATGGAACCAAGGCATCAGGAGCATTTATACTGACAGCAAGTCACAATCCAGGTGGTCCCAACGAGGATTTTGGAATTAAGTACAACATGGAAAATGGTGGACCTGCTCAAGAGGCAATTACTGATAAGATCTATGAGAACACAAAATCCATAAAGGAGTATATAATTGCAGAAGATCTTCCTGATGTGGATATCTCTGCAATAGGCATTACAAACTTCACGGGGCCTGAGGGACAATTTGATGTCGAGGTTTTTGATTCAGCATTTGATTATGTGAAATTGATGAAGTCGATTTTTGATTTCCAATCTATCCAAAAGCTGCTCTCATCACCAAAATTCACATTCTGTTATGATGCACTGCATGGAGTTGGTGGAGCTTATGCAAAGCGAATATTTGTTGAAGAGCTTGGTGCACAAGAAAGCTCATTGCTGAACTGCGTTCCCAAGGAAGACTTTGGAGGAGGGCATCCAGATCCTAATCTAACCTATGCAAAGGAGTTGGTTGCATGTATGGGATTGGGTAAATCAGATGCTAAAAATGAGCCACCAGAGTTTGGTGCCGCTTCTGATGGTGATGCAGATCGTAACATGATCCTTGGCAAAAGGTTTTTTGTTACTCCATCAGATTCTGTTGCTATCATTGCTGCAAATGCAGTTGACGCAATACCCTATTTCTCTGCTGGTTTAAAGGGAGTTGCCAGGAGTATGCCCACATCTGCTGCTCTTGATGTTGTAGCCAAACATTTAAATCTGAAATTCTTTGAGGTCCCAACTGGCTGGAAATTTTTTGGTAACTTAATGGATGCTGGATTATGTTCAATTTGTGGTGAAGAAAGTTTTGGAACTGGTAGGTTTCATATTTTGTGTATGAAATTTCTGTTAATTATGACATACACATATGTAAAGCAATATTTTGATCTGTTGTATCTACGGACAGGTTCGGACCACATTCGTGAGAAAGATGGAATCTGGGCTGTTTTAGCTTGGCTTTCTATTCTCGCTTATGAAAATAAGGAAAACCTTGGTGGAGCAAAGCTTGTTACTGTTGAAGAAATAGTTCGCAATCATTGGGCTACCTATGGCCGCCACTATTATACTCGATATGACTATGAGAATGTTGATGCAGGTGCTGCAAAAGAACTAATGGCATATTTGGTCAAACTTCAATCTTCCCTTCCAGAAGTTAATAAGATCATAAAAGGAATACACTCAGATGTCTCAAATGTTGCGAAAGCTGATGAATTTGAATACAAAGATCCTGTTGATGGTTCCATCTCAAAGCATCAGGGTATTCGATATATGTTTGAAGATGGGTCACGATTGATTTTCCGCCTCTCGGGAACTGGCTCAGAAGGTGCAACCATCCGTGTCTATATTGAGCAGTATGAGAAGGATTCGTCAAAGACTGGGAGGGATTCTCAAGAAGCCCTTGGTCCTCTTGTGGAGGTTGCTCTCAAGCTTTCTAAGATGCAGGAATTCACAGGCCGTTCTGCTCCCACTGTTATCACATAG 1956 0.4213 MEALSKGSLKMRELRRSSSLMCGPNGTQTPPYFSRWEAMVMFKVSRVTTSPFDGQKPGTSGLRKKVKVFKQQNYLHNFVQSTFNALSQDKIRGMTLVVSGDGRYFSKDAIQIIIKMAAANGVRSVWVGQNGLLSTPAVSAVIRERVGKDGTKASGAFILTASHNPGGPNEDFGIKYNMENGGPAQEAITDKIYENTKSIKEYIIAEDLPDVDISAIGITNFTGPEGQFDVEVFDSAFDYVKLMKSIFDFQSIQKLLSSPKFTFCYDALHGVGGAYAKRIFVEELGAQESSLLNCVPKEDFGGGHPDPNLTYAKELVACMGLGKSDAKNEPPEFGAASDGDADRNMILGKRFFVTPSDSVAIIAANAVDAIPYFSAGLKGVARSMPTSAALDVVAKHLNLKFFEVPTGWKFFGNLMDAGLCSICGEESFGTGRFHILCMKFLLIMTYTYVKQYFDLLYLRTGSDHIREKDGIWAVLAWLSILAYENKENLGGAKLVTVEEIVRNHWATYGRHYYTRYDYENVDAGAAKELMAYLVKLQSSLPEVNKIIKGIHSDVSNVAKADEFEYKDPVDGSISKHQGIRYMFEDGSRLIFRLSGTGSEGATIRVYIEQYEKDSSKTGRDSQEALGPLVEVALKLSKMQEFTGRSAPTVIT* 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0526 651 PANTHER PHOSPHOHEXOMUTASE FAMILY MEMBER 42 435 IPR045244 GO:0004614|GO:0005975
Vvi1g0526 651 CDD PGM1 47 651 - -
Vvi1g0526 651 FunFam Phosphoglucomutase 5 243 351 - -
Vvi1g0526 651 SUPERFAMILY Phosphoglucomutase, C-terminal domain 510 651 IPR036900 GO:0016868|GO:0071704
Vvi1g0526 651 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 355 508 IPR005846 GO:0005975|GO:0016868
Vvi1g0526 651 SUPERFAMILY Phosphoglucomutase, first 3 domains 339 515 IPR016055 GO:0005975|GO:0016868
Vvi1g0526 651 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 239 347 IPR005845 GO:0005975
Vvi1g0526 651 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 55 202 IPR005844 GO:0005975|GO:0016868
Vvi1g0526 651 Gene3D - 43 242 - -
Vvi1g0526 651 Gene3D - 243 351 - -
Vvi1g0526 651 Gene3D - 352 510 - -
Vvi1g0526 651 SUPERFAMILY Phosphoglucomutase, first 3 domains 238 352 IPR016055 GO:0005975|GO:0016868
Vvi1g0526 651 ProSitePatterns Phosphoglucomutase and phosphomannomutase phosphoserine signature. 156 165 IPR016066 GO:0000287
Vvi1g0526 651 PRINTS Phosphoglucomutase/phosphomannomutase family signature 331 346 IPR005841 GO:0005975|GO:0016868
Vvi1g0526 651 PRINTS Phosphoglucomutase/phosphomannomutase family signature 260 279 IPR005841 GO:0005975|GO:0016868
Vvi1g0526 651 PRINTS Phosphoglucomutase/phosphomannomutase family signature 296 309 IPR005841 GO:0005975|GO:0016868
Vvi1g0526 651 PRINTS Phosphoglucomutase/phosphomannomutase family signature 155 169 IPR005841 GO:0005975|GO:0016868
Vvi1g0526 651 FunFam Phosphoglucomutase 5 491 651 - -
Vvi1g0526 651 FunFam Phosphoglucomutase 5 43 242 - -
Vvi1g0526 651 Gene3D - 511 651 - -
Vvi1g0526 651 Pfam Phosphoglucomutase/phosphomannomutase, C-terminal domain 561 614 IPR005843 GO:0016868|GO:0071704
Vvi1g0526 651 SUPERFAMILY Phosphoglucomutase, first 3 domains 41 267 IPR016055 GO:0005975|GO:0016868
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0526 Vvi-Chr1 4989688 5011478 Dispersed