Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0523 ATGCTTGAAAAACATTCTACTTCTCTGACTGACTCTCTCCGATTCTTTCTTTTCGGAGCTTTTGGGTCTTCTTTGGCTGTCTCTCCCTACTCCCTAGTCCCTCCCTTCAAACCGCCTTTTTTTAGTCTAAAAAATAGAACCACTTCTCCATCTGCTGCTCATAATCTCTCTCAAATAGTCTCTGTTTTTCTCTCTGTAAATACCAAGAACAGATCACCATCATCATCATCGTCATCATCAATGGCGGCAAACAAGTTTGCAACTATGTTGCATCGAAACACGAACAAGATCACGCTTATTCTCATCTATGCTGTTCTCGAATGGATTCTGATCGTCCTTCTTCTTCTCAACTCTCTTTTCTCTTATCTAATCGTGAAATTTGCAGACTACTTCGGCCTCAAGAGACCCTGCCTCTGGTGTTCTAGGCTCGATCACATTTTTGAGCCTGAGAAGGGAAAGACTTCTTACAGAGGTCTTGTGTGTGAAACCCACGCTGCGGAGATTTCGAAACTGGGGTACTGTTCGAATCATCGGAAGTTGGCTGAATTGCAAGATATGTGTGAGGATTGCTCGTCCTCATCGCGGCCTGATTATTGTGAATTATCGAAAAAGATCGCTTTCATTCCATGGGTGAAGCAGATTGGTATGATTCAGAGTGATGGTGAGAAGATTGTGGAAAATGGGGAGGTAAATTTGAGGTGTTCCTGCTGTGATGTTAGCTTGAACAGCAAATTCTACTCTCCTTATTTTCTGATCAAACCCTCTTGGGGGGTTTTGGATTATACTCAGAAAGGGAATTTGATAACCGAAACTGGGATCGACGATGGCATTGACGAAGTCGATAATTCCGATAGAAGCAGATCGGATTTTGCGGCTGATCGATGCGAGGAAGATGAGGGGACTAATGGAAACAAGGGAAATCAGATACTTTCTGATGTTGATGCAAGCTCTGGAACAAGAGAAGAGGAGGCAGAGGAGGATTGTTCATATTCCGTATCTAATTTTGGTTGCAGGGAGACGATGGCTAGTGAAGATGATAAAGTGGAGATGATCGTAGAGAAAGCGCAAGAACCCATCAAGGAGGAAGGTACGAAGGAGCAAGGTGGGAATTTTTGCATCGAAGATCCGTTTTGCGATGGGAACAGTAGTCGAGTTTGCGCCGAGGAAGATGCATCTATTAATATTCCGCCTCAGCATCTTGAGTATTACGTTGATCGTGATGATTTTCGATTGGTTCCGGTTGAGTTGATCGATTTCACTGCTGCCGATATCCAGAATGGGTACAGAACAGAGGACGTAGGTCAAGCAAACTGGGATCGCCGAGAAGTCATACTGGGTTCTGAATTTGGTGCAGAGGCGCAAATTGAATCAATTATGGAGAACAAATGCAGTCAAGGAAAGCCAGTGGCAGTAGAATTTTGTGCTCATGAGACTAAGGAGGAACCCGAACTGGAGTTTGCATTGGTTGAATCCATGGAGATAGATGAGAATGAGAATTCTTCGACTTTACGTGGTGAAGAAGGGGATTTAGTGTGGGAGGTATATCAACCTGTTGCCATTACTCAAGCAACTCAAACTCCATTTAATGATGTAGTTGATGTTCAAGAAACTGATGCAGCGGCCGGAGGAGAAAAGATTTCAGAAACTAATCCAGCATCTGTTGAAGTGTTTCGGATGAGGATTGATGAAACTGAAGTAGAGATCTTGATAGGGACAGAGATGCCTGATCAGGCACCCACAGATAAGATTCGAGCTCAAGAAATTCTTCCTTCAGATCCTTGCATCCAGGAAGATCCATCGACTAGTTCTGCTAATTTGTATGCTGATGATGATCATTGTTCTGAGCAAGCTGAGGAAGAAACTTTGGAATGCAAAACCATGACAGTTGAGATAAGTGAGCAAGCAATAAACACTCATTTGTTGTGTACAGAGCTTAATGAAATTGAGGATGAAATTGAGGAAGCTAAAGTACCTAATTCACCCGCTTCTATTGAAGGTCCTACGCCAGCCGAGGAAGAAGCATTACAATGCAAAACCATACTTGTTGAGACAAGTGAGCAAGCTATAGACACTCATTTCTCAACATGTTTAGAGCTTAATGAAATCGAGGAGGAGAGAGTTCCCGATACACCCACTTCCATTGATGGGCTCAATCACTTACACAAGAGATTACTGCTCCTCGAGAAACGAGAATCAGGAACTGAAGAGTCTTTGGATGGTAGTGTCATAAGTGAGTTTGAAGGTGGTGATGTTGGTCTGACCGTTGAAAAGCTGAAATCAGCACTGAGGTCTGAACGAAAGGCTTCAAGTGTTTTATATGCAGAACTAGAAGAAGAAAGAAGTGCTTCCGCAGTAGCAGCCAATCAGACTATGGCAATGATAAATCGACTGCAGGAAGAGAAGGCAGCAATGCAGATGGAAGCTTTGCAGTACCAGAGAATGATGGAAGAACAATCTGAATATGACCAGGAAGCCTTGCAGCTTTTGAATGAGCTTATGATAAAGAGGGAAAAAGAGAAGCAAGAGCTAGAGAAAGAGCTGGAAATATATCGCAAGAAGGTCTTGGATTATGAGGCAAGAGAAAAAATGATGTTAAGAAGAATGAAAGAGGGTAGTGCCAGAAGCAGAACTTCCTCTGCATCTTGTAGCAATGCAGAAGATAGTGATGGGCTATCTGTTGAGTTGAATCATGAAGAAAAGGAAGAAGATAGCTTATATGGATTTCGAGAAAGTGGCGACCACAACACCCCTGCTGATGCAGTTCTAAGTTTGGAGGAATCTTTGGCTACCTTTGAGGAAGAGAGGCTTTCCATTCTTGAGCAACTGAAGGTTTTAGAAGAGAAGCTTTTCACGTTGGCTGATGAGGAGGAACATGACCCTAACAATATGAAGCCAATTCAGCATTCCTATGAAGAGAATTGCAAAGATTTTGATGAGAATTGTGACCATAGCCCTGAAGTAAATGGTCTTGGAAATGGATTTTCCAAGGACATGAATGGAAAGCATCACCAAGAGAGAAGAATCTCAGGACCAAAGGCAAAGAGACTTCTTCCTCTTTTTGATGCAATTGTTGCAGAAACTGAAGATGGGTTATTGGATGGAAATGACATAGTATTTGACTCATTCCTCTTACAAGACTCGTCAGTCACCAAGTTTGATATAGAGAGTAAGAAGAATGCAATTGAAGAGGAGGTGGATAATCTCTATGAGAGGCTACAAGCTCTTGAGGCAGATAGGGAATTTCTAAAGCATTGCATAAGCTCCTTGAACAAAGGAGATAAGGGGATGGATCTTCTCCAGGAGATCTTACAACATCTTCGTGATCTGAGGAGTGTGGAACTCCGAGTGAGGAATTTCAGTGATGGTGCTCTAGTATGA 3378 0.4269 MLEKHSTSLTDSLRFFLFGAFGSSLAVSPYSLVPPFKPPFFSLKNRTTSPSAAHNLSQIVSVFLSVNTKNRSPSSSSSSSMAANKFATMLHRNTNKITLILIYAVLEWILIVLLLLNSLFSYLIVKFADYFGLKRPCLWCSRLDHIFEPEKGKTSYRGLVCETHAAEISKLGYCSNHRKLAELQDMCEDCSSSSRPDYCELSKKIAFIPWVKQIGMIQSDGEKIVENGEVNLRCSCCDVSLNSKFYSPYFLIKPSWGVLDYTQKGNLITETGIDDGIDEVDNSDRSRSDFAADRCEEDEGTNGNKGNQILSDVDASSGTREEEAEEDCSYSVSNFGCRETMASEDDKVEMIVEKAQEPIKEEGTKEQGGNFCIEDPFCDGNSSRVCAEEDASINIPPQHLEYYVDRDDFRLVPVELIDFTAADIQNGYRTEDVGQANWDRREVILGSEFGAEAQIESIMENKCSQGKPVAVEFCAHETKEEPELEFALVESMEIDENENSSTLRGEEGDLVWEVYQPVAITQATQTPFNDVVDVQETDAAAGGEKISETNPASVEVFRMRIDETEVEILIGTEMPDQAPTDKIRAQEILPSDPCIQEDPSTSSANLYADDDHCSEQAEEETLECKTMTVEISEQAINTHLLCTELNEIEDEIEEAKVPNSPASIEGPTPAEEEALQCKTILVETSEQAIDTHFSTCLELNEIEEERVPDTPTSIDGLNHLHKRLLLLEKRESGTEESLDGSVISEFEGGDVGLTVEKLKSALRSERKASSVLYAELEEERSASAVAANQTMAMINRLQEEKAAMQMEALQYQRMMEEQSEYDQEALQLLNELMIKREKEKQELEKELEIYRKKVLDYEAREKMMLRRMKEGSARSRTSSASCSNAEDSDGLSVELNHEEKEEDSLYGFRESGDHNTPADAVLSLEESLATFEEERLSILEQLKVLEEKLFTLADEEEHDPNNMKPIQHSYEENCKDFDENCDHSPEVNGLGNGFSKDMNGKHHQERRISGPKAKRLLPLFDAIVAETEDGLLDGNDIVFDSFLLQDSSVTKFDIESKKNAIEEEVDNLYERLQALEADREFLKHCISSLNKGDKGMDLLQEILQHLRDLRSVELRVRNFSDGALV* 1126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0523 1125 Coils Coil 787 860 - -
Vvi1g0523 1125 Coils Coil 1051 1085 - -
Vvi1g0523 1125 PANTHER MYOSIN-BINDING PROTEIN 2 81 1121 IPR039306 GO:0017022
Vvi1g0523 1125 Coils Coil 928 948 - -
Vvi1g0523 1125 ProSiteProfiles GTD-binding domain profile. 753 851 IPR007656 -
Vvi1g0523 1125 Pfam Zein-binding 757 847 IPR007656 -
Vvi1g0523 1125 Coils Coil 759 779 - -
Vvi1g0523 1125 MobiDBLite consensus disorder prediction 874 890 - -
Vvi1g0523 1125 MobiDBLite consensus disorder prediction 274 325 - -
Vvi1g0523 1125 MobiDBLite consensus disorder prediction 867 902 - -
Vvi1g0523 1125 MobiDBLite consensus disorder prediction 278 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0523 Vvi-Chr1 4953872 4957524 Dispersed/Transposed