Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0517 ATGGATGAAAGGCCAGTCACTCTTGAACCTCTGGTCAACGGCGAAGGCGACGTCACCAATGCTCACAGCAACCACGGTTGGCAGAAGGTCACCTACGCCAAGCGCAATCGGAAGCAGCAGTCCAATAATTCAGATTCCGTTGGGAATTCTGAGAAGGTTCGTGTCAATGGAACGCTCGCCACCGGGGACAAGCCTAATGTGTTCCGATCACTCGAGCAGCAGGCGGAGGAGCGGCGCCGGCGGGTCCTGGAAGCTCAGATGGTGGCTGCTGCTGCTGCCGATGATCATCAGGTTAGATCGAAGTCCAAGCACAGGTCCGATGATGAAGATGACGACAGTGATGACGAAGTCGCGGCGGAGAACGGGCAGGTCCAAGAGAAGAAGGTGAAGAAGCCTAAGGTGAAGAAGCCCAAGGTTACGGTGGCTGATGCGGCCTCCAAGATTGATGCGGCTGATCTGGCGGCTTTTCTTGTTGATGTTTCGGCATCGTACGAATCGAAAGAGGATATACTGCTAATGCGGTTTGCCGATTATTTTGGTCGCGCATTTTCAGCTGTGAATTCTTCGCAGTTTCCTTGGATGAAGATGTTCAGGGAGTCAACGGTCGCCAAGATCGCAGATGTCCCTCTTTGTCATATTTCGGATGTTGTTTATAAGACATCAGTTGACTGGATCAACCAACGTTCCTCTGAGGCACTTGGTTCCTTTGTGTTATGGTCTTTAGACTGCATTCTTTCTGACTTAGCAAGCCAGCAAGCTGTTACAAAAGGCTCCAAAAAGGGCTTGCAGCATGCATCATCGAAATCTCAGGCTGCAATATTTGTAGTATTAGCAATGGTATTGAGGAGAAAGCCTGATGTGTTAATTAATTTGTTACCAACATTGAGGGAAAATTCGAAGTATCAAGGACAGGATAAGCTTTCAGTTATAGTATGGATGGTGGCTCAGGCTTGTCAAGGAGACCTGGCTGTAGGGTTGTATTTATGGGCACATAACATATTGCCTATAGTTAATGGCAAATCAAGTTGTAATCCACAGTCCAGGGATTTGGTTCTACAATTAGTGGAAAGAATTTTGTCTGCCCCAAAAGCCCGCACTATTTTAGTAAATGGAGCTATTAGGAAGGGTGAGCGATTAGTGCCTCCCTCAGCATTTGAGATATTGATGCGAGCTACCTTCCCTGCATCTTCAGCACGGATAAAGGCAACTGAAAGGTTTGAGGCAGTATACCCCACTCTAAAAGAAGTAGCCCTAGCTGGTCCTGCTGGAAGCAAAGCAATGAAGCAGGCTTCACAGCAGATACTGACTTTCACCATCAAAGCAGCAGGAGAAAGTATCCCAGAATTATCCAATGAAACAAGTAGCATTTTTATCTGGTGTTTGACTCAAAATCCTGATTGTTATAAGCAATGGGACAGGATCTATTTGGATAATCTAGAAGCTAGTGTTGCAATTCTGAGAAAGCTTACCGAGCAATTGAAGGAGTTATCTCTGAAACAATCTTCTCTTGATCCTTTAAGGGAAACTCTCAAGAGTTTTAGGCACAAGAATGAGAAAGAATTGGCTGGTGGAGAGGATGCTGCTCATCAAGCACTCCTCAAGGATGCAGACAAGTACTGTAAGGGAATTTTAGGAAGGGTATCTCGTGGCCATGGGTGCATGAAAAGTTTGACCTTTGCTGTCATTGCCGCTGTAGCTGTTGGTGCTGCACTCATGTCCCCAAACATGGAATCCTGGGATTTGAAGAAGCTGTCTGTAGTGTTCAGCTCCTCACCATCCTTCTGA 1785 0.4661 MDERPVTLEPLVNGEGDVTNAHSNHGWQKVTYAKRNRKQQSNNSDSVGNSEKVRVNGTLATGDKPNVFRSLEQQAEERRRRVLEAQMVAAAAADDHQVRSKSKHRSDDEDDDSDDEVAAENGQVQEKKVKKPKVKKPKVTVADAASKIDAADLAAFLVDVSASYESKEDILLMRFADYFGRAFSAVNSSQFPWMKMFRESTVAKIADVPLCHISDVVYKTSVDWINQRSSEALGSFVLWSLDCILSDLASQQAVTKGSKKGLQHASSKSQAAIFVVLAMVLRRKPDVLINLLPTLRENSKYQGQDKLSVIVWMVAQACQGDLAVGLYLWAHNILPIVNGKSSCNPQSRDLVLQLVERILSAPKARTILVNGAIRKGERLVPPSAFEILMRATFPASSARIKATERFEAVYPTLKEVALAGPAGSKAMKQASQQILTFTIKAAGESIPELSNETSSIFIWCLTQNPDCYKQWDRIYLDNLEASVAILRKLTEQLKELSLKQSSLDPLRETLKSFRHKNEKELAGGEDAAHQALLKDADKYCKGILGRVSRGHGCMKSLTFAVIAAVAVGAALMSPNMESWDLKKLSVVFSSSPSF* 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0517 594 Coils Coil 476 499 - -
Vvi1g0517 594 MobiDBLite consensus disorder prediction 1 69 - -
Vvi1g0517 594 PANTHER TRANSMEMBRANE PROTEIN 214 21 570 IPR019308 -
Vvi1g0517 594 MobiDBLite consensus disorder prediction 90 136 - -
Vvi1g0517 594 MobiDBLite consensus disorder prediction 17 56 - -
Vvi1g0517 594 Pfam TMEM214, C-terminal, caspase 4 activator 34 560 IPR019308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0517 Vvi-Chr1 4912484 4918288 Dispersed