Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0516 ATGTATGTAATTAGATTGGTACAGGTCAAGGAGATGCCTCGAAAGCCAGCAAGGCGTAGGCGCCGCCAATTATTGAGACCTCTGCCTTTTTCCTTTTCCCCATTTTCTCGTACGGTTTCTCAAGTTGCTTCTTATTGCAAGGTTAATCATCAAATCCATGTGTCCAAGTTGGACAGGAAATCTCCCCCTAATGCTGCAGGCAACAGATTTATTAATCACACTTTGGAAGAGAAGAGTGCACGGTCTGAATCTTCAGAAGAAGACAGTTCTGAAGTGGTTGCCCAAGCAGATTTTGCCTTCTTTGATCCAAAACCAGATGACTTTCATGGAGTGAAAATCTTGCTGCAGACCTACCTTGACAATAAGCAATGGGATTTGAGTGGGTTTGTAGACTTAATATTGGGAAATACGACAGTAGGAACTGTTGTTAAAATAGAGGATGATGAAGATGATGGAGTTTTCTCTCTTATTACTGCCCTTAACCTGGGGAGATACAAGGATCATAAATGTATTATGGAACTCAAGGAGTTCCTGCTAAAAGTAGGCCCTGAGGAGGATGTAAAAGATTCGTTGAGATTACTTTTGGGAGAAGAAGCACACAATGTGGGTCTCTCAGTCTCACAATGTGTGGTGAATCTTCCTCCCCAGCTTTTGCCACCTCTTTGCGATGCCCTCTTTGATGAAGTCTCATGGGCTACAGAAGATGAGCCTACAGTGGAGCTCAGGAGTTCCTTTTCCTTTAAGATTTATCTACTGATTAGTAGAATCTACAAGCATAAGAATGCAGACCAAAAAAAAGGCCCAAGAGGTGATGTTGATGAAGCAATAATATATATTAAGCTTGAAGATGAAATTTTTCATAAGCTCTCATGGTCCTTCAGTTTTCCTCTGCACACACAGCATGTTGCAACTCATAGGGCAAGTAGTGGTGTCATCAGCCTATCGTTGTTTTTGCTAAGAAATTACCAGTTAATGTGGTTGGTCATGGCAATTGAAGCAGACAAAGCTTCTACATTCTGGAAAGAGTTGCACACTTTGCTAGATGAACCCCGAGGCCATGAAAAGCAAAACCGAAAGTATCATGAAGTTGCCCCATTTTCGCGAAGCCTACAACGAAGACGCCAAGATGGATGA 1134 0.4215 MYVIRLVQVKEMPRKPARRRRRQLLRPLPFSFSPFSRTVSQVASYCKVNHQIHVSKLDRKSPPNAAGNRFINHTLEEKSARSESSEEDSSEVVAQADFAFFDPKPDDFHGVKILLQTYLDNKQWDLSGFVDLILGNTTVGTVVKIEDDEDDGVFSLITALNLGRYKDHKCIMELKEFLLKVGPEEDVKDSLRLLLGEEAHNVGLSVSQCVVNLPPQLLPPLCDALFDEVSWATEDEPTVELRSSFSFKIYLLISRIYKHKNADQKKGPRGDVDEAIIYIKLEDEIFHKLSWSFSFPLHTQHVATHRASSGVISLSLFLLRNYQLMWLVMAIEADKASTFWKELHTLLDEPRGHEKQNRKYHEVAPFSRSLQRRRQDG* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0516 377 PANTHER BRCA2 AND CDKN1A INTERACTING PROTEIN 15 347 IPR025602 -
Vvi1g0516 377 Pfam BCCIP 95 286 IPR025602 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0516 Vvi-Chr1 4904533 4910900 Dispersed