Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0511 ATGGAACAGTCTGGACAAGTGACCGTTGAAGCTAGGATGCTTGATTCAAAAGCATCTCATCTCCAGAAAGAAGAAATGGCTGAGTTACTCTCTCTCCTTCCGCCTCTTGAGGGAAAACATGTTGTGGAGATAGGGAAAGGGATTGGGCATTTCACAGATGAATTAGCCAAGCAGGCTGCTCAAGTTCTTGTTATTGATTTTACTGAGAGCAAGATCCCTAAGAATGAGTTCCTCAATGGGCACTTCAACAATGTCACGTTCATGTGTGCTGATGTTACTTCTCCTAACCTGGATATTTCACCAGGTTCTGTGGACTTGATTTTCTTAAATTGCCTACTAACACATCTCTCAGATAAAGAGGTTGAGAATCTGGCTGAAAGGATGGTTAAATGGTTGAAAGTTGGTGGTTTTCTCTTCCTTAGAGAGTCTTCTTTTCATCAATCGGGTGATTTTCAAAGCAAAAACAACCCCACACACTATCGTGAACCAAGATTTTATACAAAGGTATTTAAGGAATGCTGTACGTGTGATGATTTTGGGAACTCCTTTGAACTGTCGCTTGTGACCTTCAAATGCGTTGGGCCTCATATCTATTGGCTATGGAAAAATGTTAATTCACAGGATGACAAGGGATTTCAACGTTTCCTGGATAATGTGCAGTATAAGTGCAGGGGCATCTTACGATATGAGCGCATCTTTGGTGAAGGTTTTGTAAGCACTGGGGGACTTGAAACAACAAAGGAATTTGTGGCTAAGTTGGAGCTTAAGCCCGGCCAGAAAGTCCTGGACGTAGGTTGTGGCATTGGCGGAGGTGACTTCTACATGGCTGAGGACTTTAATGTTGAAGTTGTTGGCATTGATCTGTCAATAAACATGATTTCCATTGCCCTTGATCGTGCCATTGGACGCAATCGCTTGGTTGAATTTGAGGTTGCAGATTGCACCAAGAAAACATATCCTGATAGTACATTTGATGTGATCTACAGTCGTGACACTATTCTTCACATACAAGACAAACCTGCATTATTTAGATCTTTCTTCAAGTGGTTGAAGCCTGGAGGAAAAGTTCTAATTAGTGATTACTGCAAAAGATCAGGACCTCCATCACCTGAATTTGAAGCATATATTGGACAGAGAGGATATGATTTGCATGATGTAGAGGCATATGGACAGATGCTTAAAGATGCTGGTTTTGATGAGGTCATTGCAGAGGACCGAACAGATCAGTTCATCGAAGTATTGCAAAAGGAAATGGATTCTATTGAGAAGGAAAAAGACAAATTCATTAGCGACTTTTCTGAAGAGGACTACAAAGATATAGTTGGTGGATGGAAATCAAAGCTGGTAAGGAGCTCAATGGGTGAGCAGAGGTGGGGATTGTTCATTGCCAAGAAAAAATTGAGCTAA 1407 0.4136 MEQSGQVTVEARMLDSKASHLQKEEMAELLSLLPPLEGKHVVEIGKGIGHFTDELAKQAAQVLVIDFTESKIPKNEFLNGHFNNVTFMCADVTSPNLDISPGSVDLIFLNCLLTHLSDKEVENLAERMVKWLKVGGFLFLRESSFHQSGDFQSKNNPTHYREPRFYTKVFKECCTCDDFGNSFELSLVTFKCVGPHIYWLWKNVNSQDDKGFQRFLDNVQYKCRGILRYERIFGEGFVSTGGLETTKEFVAKLELKPGQKVLDVGCGIGGGDFYMAEDFNVEVVGIDLSINMISIALDRAIGRNRLVEFEVADCTKKTYPDSTFDVIYSRDTILHIQDKPALFRSFFKWLKPGGKVLISDYCKRSGPPSPEFEAYIGQRGYDLHDVEAYGQMLKDAGFDEVIAEDRTDQFIEVLQKEMDSIEKEKDKFISDFSEEDYKDIVGGWKSKLVRSSMGEQRWGLFIAKKKLS* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0511 468 PANTHER PHOSPHOETHANOLAMINE METHYLTRANSFERASE 2 464 - -
Vvi1g0511 468 CDD AdoMet_MTases 260 361 - -
Vvi1g0511 468 Pfam Methyltransferase domain 41 136 IPR041698 -
Vvi1g0511 468 Coils Coil 411 431 - -
Vvi1g0511 468 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 9 189 IPR029063 -
Vvi1g0511 468 Gene3D Vaccinia Virus protein VP39 1 215 IPR029063 -
Vvi1g0511 468 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 229 466 IPR029063 -
Vvi1g0511 468 Gene3D Vaccinia Virus protein VP39 216 467 IPR029063 -
Vvi1g0511 468 Pfam Methyltransferase domain 248 400 - -
Vvi1g0511 468 ProSiteProfiles Phosphoethanolamine N-methyltransferase (PEAMT) (EC 2.1.1.103) family profile. 1 466 IPR025771 GO:0000234|GO:0006656
Vvi1g0511 468 CDD AdoMet_MTases 41 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0511 Vvi-Chr1 4858818 4861820 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g0511 1 465 Acyl Lipid Metabolism Gene Families AT3G18000 70.886 0.0 701