Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0510 ATGTCTTCCACTTCGACACTTTCGCTGCCTCTACAACGCAATGCCCGGAAAAAAGGCTTCCCATCCTCCCCAGTCACAAAGCCATTCACAGCTAATCTTACTTTTTCGTTTTCATTGCGTTTAACTAAAGCTATTCACGTAAAATCTTCCAGCACTGCAAAGTTTAATGAAGTTGTGGTGGATGAAGAGATAGACAAGATTAGGAGGCTCCAAAATGGCTCAGATGTTCGAGGGGTTGCGGTGGAGGGTGAGAAGGGCCGAACTGTGGATCTCACGCCACCGGCTGTGGAAGCAATTGCTGAGAGTTTTGGTGAGTGGGTAATGAATAGATTGGAGAGTGAAGGAGGCGTGCCAGTTGAAGGTGTTAGGGTGTCTCTTGGGCGTGACCCTCGAATCTCTGGCGCATCTTTGAGTGCAGCAGTGTTTTCAGGTCTCGCTCGAGCTGGTTGTTTAGCGTTCGATATGGGACTTGCAACCACACCCGCTTGTTTCATGAGTACATTGTTGCCTCCGTTTGCCTATGACGCTTCTATAATGATGACAGCATCTCACTTACCCTACACGCGAAACGGCCTAAAATTCTTCACTAGGAAAGGGGGGCTGACCTCGCCGGAAGTGGAGGCAATATGTGACAAGGCGGCCAGGAAATATGCCAACAGGCTTACAAAAGTATCAACCACGTTGAGCATTCCTCCAACAAAAGTTGATTTCATGAGCACTTATGCGAAGCATCTCCGGGACATCATCAAGGAGAGGGTGAACCATCCCTTGCACTATGACACTCCACTCAAAGGGTTTCAGATAATTGTGAATTCTGGGAATGGATCAGGAGGCTTCTTCACATGGGACGTGTTAGATAAACTTGGTGCAGACACCTTTGGCTCCCTAAACCTCAGCCCAGATGGAATGTTCCCCAACCACATTCCCAACCCTGAGGACAAAACTGCCATGGCCCTAACAAAGGCTGCAGTCCTCGAAAACAATGCTGATCTTGGAATTGTTTTTGATACCGATGTAGATCGCAGTGGTGTGGTGGATAGTTCAGGGAACCCCATCAATGGTGACAAGCTCATTGCACTCATGGCTGCCATTGTATTGAGGGAACACCCTGGATCCACCATTGTCACCGATGCTCGCACAAGCATGGCTCTCACGCAATTCATCGCCAACAGAGGGGGTCATCATTGCTTGTATCGTGTTGGCTACAGGAATGTCATTGATAAAGGAGTTCAGCTTAATAAAGATGGCATTGAAGCACATCTCATGATGGAAACATCTGGCCATGGTGCTCTTAAAGAGAATCATTTCCTCGATGATGGGGCTTACATGGTGGTAAAAATCATCATAGAAATGGTACGCATGAAGCTTGCAGGATCATATGAAGGAATTGGGAGTCTCATAGAAGACCTACAAGAACCATTTGAATCCGTTGAGCTGAGGATGAACGTCATCTCTGAGCCTAAACATGCAAAGGCAAAAGGTGCTGAAGCAATTGAAGCATTCCGAAACTACATCGAGGAAGGAAAGCTAGAGGGTTGGGAATTGGATTCCTGTGGAGACTGTTGGGTAAGTGAAGGCTGCCTCGTGGATTTGAACGACACGCCAGCTGCCATTGATGCTTACATGTACAGGGCTAAGGTTTCAGACAAAGAACATGGACAACATGGTTGGATACACCTTCGGCAGAGCATTCACAACCCAAATATTGCAGTAAACATACAATCATCTGTGCCTAGTGGCTGCCAATCCATGGCAAGAGTACTCAGAGAGAAGTTTCTCATTGCAAGTGGAATGGAGAAAAGTCTTGACATCACTCAGATCGATAAGTACGCAAAAAGTGGACAGGTAGGTTAA 1854 0.4698 MSSTSTLSLPLQRNARKKGFPSSPVTKPFTANLTFSFSLRLTKAIHVKSSSTAKFNEVVVDEEIDKIRRLQNGSDVRGVAVEGEKGRTVDLTPPAVEAIAESFGEWVMNRLESEGGVPVEGVRVSLGRDPRISGASLSAAVFSGLARAGCLAFDMGLATTPACFMSTLLPPFAYDASIMMTASHLPYTRNGLKFFTRKGGLTSPEVEAICDKAARKYANRLTKVSTTLSIPPTKVDFMSTYAKHLRDIIKERVNHPLHYDTPLKGFQIIVNSGNGSGGFFTWDVLDKLGADTFGSLNLSPDGMFPNHIPNPEDKTAMALTKAAVLENNADLGIVFDTDVDRSGVVDSSGNPINGDKLIALMAAIVLREHPGSTIVTDARTSMALTQFIANRGGHHCLYRVGYRNVIDKGVQLNKDGIEAHLMMETSGHGALKENHFLDDGAYMVVKIIIEMVRMKLAGSYEGIGSLIEDLQEPFESVELRMNVISEPKHAKAKGAEAIEAFRNYIEEGKLEGWELDSCGDCWVSEGCLVDLNDTPAAIDAYMYRAKVSDKEHGQHGWIHLRQSIHNPNIAVNIQSSVPSGCQSMARVLREKFLIASGMEKSLDITQIDKYAKSGQVG* 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0510 617 Gene3D - 346 463 - -
Vvi1g0510 617 PANTHER PHOSPHOHEXOSE MUTASE 59 610 - -
Vvi1g0510 617 SUPERFAMILY Phosphoglucomutase, first 3 domains 353 453 IPR016055 GO:0005975|GO:0016868
Vvi1g0510 617 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 241 349 IPR005845 GO:0005975
Vvi1g0510 617 FunFam phosphomannomutase/phosphoglucomutase isoform X1 71 226 - -
Vvi1g0510 617 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 353 453 IPR005846 GO:0005975|GO:0016868
Vvi1g0510 617 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 69 218 IPR005844 GO:0005975|GO:0016868
Vvi1g0510 617 Gene3D - 267 345 - -
Vvi1g0510 617 Gene3D - 71 226 - -
Vvi1g0510 617 PRINTS Phosphoglucomutase/phosphomannomutase family signature 265 284 IPR005841 GO:0005975|GO:0016868
Vvi1g0510 617 PRINTS Phosphoglucomutase/phosphomannomutase family signature 300 313 IPR005841 GO:0005975|GO:0016868
Vvi1g0510 617 PRINTS Phosphoglucomutase/phosphomannomutase family signature 329 344 IPR005841 GO:0005975|GO:0016868
Vvi1g0510 617 PRINTS Phosphoglucomutase/phosphomannomutase family signature 176 190 IPR005841 GO:0005975|GO:0016868
Vvi1g0510 617 FunFam Phosphomannomutase/phosphoglucomutase isoform B 346 467 - -
Vvi1g0510 617 CDD PMM_PGM 70 592 - -
Vvi1g0510 617 SUPERFAMILY Phosphoglucomutase, first 3 domains 239 351 IPR016055 GO:0005975|GO:0016868
Vvi1g0510 617 MobiDBLite consensus disorder prediction 1 23 - -
Vvi1g0510 617 FunFam phosphomannomutase/phosphoglucomutase isoform X1 267 344 - -
Vvi1g0510 617 SUPERFAMILY Phosphoglucomutase, first 3 domains 74 249 IPR016055 GO:0005975|GO:0016868
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0510 Vvi-Chr1 4852951 4856279 Dispersed