Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0509 ATGGCTTCCTTGGGGGAAGAACGTGACGTTCAAAAGAGCTACTGGATGGAACACTCCGCAGAATTGACTGTTGAAGCTATGATGCTGGATTCACAAGCGTCCGATCTCGACAAAGAAGAGAGGCCTGAGTTACTCTCTCTCCTGCCGCCCCTTGAAGGAAAATATGTCGTGGAACTAGGGGCAGGAATTGGGCGTTTCACAGGCGAATTAGCTAAGCAGGCTGGTCAAGTCCTTGCTATTGATTTCATTGAAAGTGTGATCCGTGAGAATGAAGTCATCAATGGGCGCTTCAAGAATACTAAGTTCGTGTGTGCTGATGTTACATCTCCTGACCTGGATATTTCACCAGGTTCTGTCGACTTGATTTTCTCAAATTGGCTACTAATGTATCTCTCAGACAAAGAGGTTGAGGATCTAGCTGAAAGGATGGTTAAATGGTTGAAAGTTGGAGGTTTTCTCTTCTTTAGAGAGTCTTGTTTTCATCAATCAGGTGATTTTAAAAGGAAAAAGAACCCGACACACTATCGTGAACCCAGATTTTACACAAAGGTCTTTAAGGAATGCCATATGTCTGATGACTTTGGGAACTCCTCTGAATTCTCACTTATCACCTTCAAATGTGTTGGAGCTTATGTGAGAAACAAAAAGAATCAAAACCAGATCTATTGGTTATGGCAGAAAGTTAATTCGCAAAATGACAAGGGGTTCCAACGTTTCCTGGATAATGTACAGTATAAATGCAGGGGCATATTACGCTATGAACGTGTCTTTGGTGAAGGCTTTGTGAGTACAGGGGGACTTGAAACAACAAAAGAATTTGTGACAAAATTGGACCTTAAGCCTAGCCAAAAGGTCCTAGATGTAGGCTGTGGCATCGGTGGAGGTGACTTCTACATGGCAGAGGATTTTGATGTTGAGGTTGTTGGTATCGATCTATCAATAAATATGATCTCCATTGCTCTTGAACGTGCCATTGGCCGCAAATGCCTGGTCGAATTCGAGGTTGCTGATTGCACCAAGAAAACGTATCCTGATAATACATTTGATGTGATCTACAGCCGTGATACCATTCTTCACATACAGGACAAGCCCGCGTTGTTCAAGTCCTTCTTCAAGTGGCTGAAGCCTGGAGGAAAAGTTCTTATTACTGATTACTGTAAAAGAGCAGGACCTCCATCACCAGAATTCCAAGAGTATATTGAACAGAGAGGATATGATCTGCACGATGTAAAGGCATATGGTCAGATGCTCAAAGATGCTGGTTTTTGTGAGGTTATCGCAGAGGACAGAACAGAACAGTTCATCAAAGTGTTGCAAAGGGAAATGGATGCTGTTGAGAAGAACAAAGACGAATTCATTCAAGACTTTTCTGAAGAGGACTATAACGAGATTGTTGGTGGATGGAAATCAAAACTGAACAGGAGCTCATCGGGTGAACAGAGGTGGGGATTGTTCATAGCCAAGAAAAATTGA 1473 0.4257 MASLGEERDVQKSYWMEHSAELTVEAMMLDSQASDLDKEERPELLSLLPPLEGKYVVELGAGIGRFTGELAKQAGQVLAIDFIESVIRENEVINGRFKNTKFVCADVTSPDLDISPGSVDLIFSNWLLMYLSDKEVEDLAERMVKWLKVGGFLFFRESCFHQSGDFKRKKNPTHYREPRFYTKVFKECHMSDDFGNSSEFSLITFKCVGAYVRNKKNQNQIYWLWQKVNSQNDKGFQRFLDNVQYKCRGILRYERVFGEGFVSTGGLETTKEFVTKLDLKPSQKVLDVGCGIGGGDFYMAEDFDVEVVGIDLSINMISIALERAIGRKCLVEFEVADCTKKTYPDNTFDVIYSRDTILHIQDKPALFKSFFKWLKPGGKVLITDYCKRAGPPSPEFQEYIEQRGYDLHDVKAYGQMLKDAGFCEVIAEDRTEQFIKVLQREMDAVEKNKDEFIQDFSEEDYNEIVGGWKSKLNRSSSGEQRWGLFIAKKN* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0509 490 Pfam Methyltransferase domain 58 155 IPR013216 GO:0008168
Vvi1g0509 490 CDD AdoMet_MTases 56 155 - -
Vvi1g0509 490 CDD AdoMet_MTases 284 385 - -
Vvi1g0509 490 Gene3D Vaccinia Virus protein VP39 240 490 IPR029063 -
Vvi1g0509 490 Pfam Methyltransferase domain 285 378 IPR041698 -
Vvi1g0509 490 Coils Coil 428 455 - -
Vvi1g0509 490 PANTHER PHOSPHOETHANOLAMINE METHYLTRANSFERASE 6 488 - -
Vvi1g0509 490 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 253 489 IPR029063 -
Vvi1g0509 490 ProSiteProfiles Phosphoethanolamine N-methyltransferase (PEAMT) (EC 2.1.1.103) family profile. 1 490 IPR025771 GO:0000234|GO:0006656
Vvi1g0509 490 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 19 203 IPR029063 -
Vvi1g0509 490 Gene3D Vaccinia Virus protein VP39 8 239 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0509 Vvi-Chr1 4845220 4848344 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g0509 2 490 Acyl Lipid Metabolism Gene Families AT3G18000 78.323 0.0 816