Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0508 ATGGGTCTAGTAGGTAAGCTTGAAGCTGAAATTCTGATCCTGGCTCCTGCTGATAAGTTTCATGAGGTTTGGGGAGGCAGGCCTCACCACATGTCCAGTGTCTCCCCTGGAAAGATTCAGAAAGTTGACCTGCACGAGGGTGACTGGGGCACTGTCGGCTCTGTCATCGAGTGGAGCTACGTTATTGATGGGAAAAATCATGTTGCTAAGGAGATTGTGGAAGCTATAGACAAGGAAAATAAAGCGGTTACATTTAAAGTCATTGAAGGAGATCTCTTGAAGGAATACAAATCCTTCAAAGCTATTGTCCAAACTATTTCAAAAGGTGAAACCACTTGGGTGCGTTGGACTTTCGAGTATGAGAAGCTCAACAAAGAAATCTCTACTCCTGTTAAATTGCTTGGATTTGTAATTCATATGAATGAAGAACTAGATGACCACCTTATTCAGGCATAA 456 0.4254 MGLVGKLEAEILILAPADKFHEVWGGRPHHMSSVSPGKIQKVDLHEGDWGTVGSVIEWSYVIDGKNHVAKEIVEAIDKENKAVTFKVIEGDLLKEYKSFKAIVQTISKGETTWVRWTFEYEKLNKEISTPVKLLGFVIHMNEELDDHLIQA* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0508 151 CDD Bet_v1-like 5 148 - -
Vvi1g0508 151 PANTHER MLP-LIKE PROTEIN 423 1 148 - -
Vvi1g0508 151 SMART Bet_v_1_2 2 151 IPR000916 GO:0006952
Vvi1g0508 151 Gene3D - 1 150 IPR023393 -
Vvi1g0508 151 Pfam Pathogenesis-related protein Bet v 1 family 3 150 IPR000916 GO:0006952
Vvi1g0508 151 SUPERFAMILY Bet v1-like 1 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0508 Vvi-Chr1 4838827 4841552 Dispersed/Tandem