Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vvi1g0506 | ATGGGTCTAGTAGGTAAGCTTGAGGCTGAAATTCTGATCCTGGCTCCTGCTGATAAGTTTCATGAGGTTTGGGGAGGCAGGCCTCACCACATGTCCAGTGTCTCCCCTGGAAAGGTTCAGAAAGTTGACCTGCACGAGGGTGACTGGGGCAATGTCGGCTCTGTCATCGAGTGGAGCTACGTTATTGATGGAAAAAATCATGTTACTAAGGACATTGTGGAAGCCATAGAGAGGGAAAATAAAACGGTTACTTTTAAAGTCATTGAAGGAGATATCTTGAAGGAATACAAATCCTTTAAGGCTATTGTCCAAGCTATTTCAAAAGGTGAAGCCACTTGGGTGCGTTGGATTATCGAGTATGAGAAGCTTAACAAGAAATCTCTGCTCCTGTTAAATTGTTTGGATTTATAA | 411 | 0.4307 | MGLVGKLEAEILILAPADKFHEVWGGRPHHMSSVSPGKVQKVDLHEGDWGNVGSVIEWSYVIDGKNHVTKDIVEAIERENKTVTFKVIEGDILKEYKSFKAIVQAISKGEATWVRWIIEYEKLNKKSLLLLNCLDL* | 137 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vvi1g0506 | 136 | Pfam | Pathogenesis-related protein Bet v 1 family | 3 | 127 | IPR000916 | GO:0006952 | |
| Vvi1g0506 | 136 | PANTHER | MLP-LIKE PROTEIN 423 | 1 | 126 | - | - | |
| Vvi1g0506 | 136 | SMART | Bet_v_1_2 | 2 | 132 | IPR000916 | GO:0006952 | |
| Vvi1g0506 | 136 | SUPERFAMILY | Bet v1-like | 5 | 124 | - | - | |
| Vvi1g0506 | 136 | CDD | Bet_v1-like | 5 | 121 | - | - | |
| Vvi1g0506 | 136 | Gene3D | - | 1 | 131 | IPR023393 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vvi1g0506 | Vvi-Chr1 | 4810644 | 4813388 | Tandem |