Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vvi1g0500 | ATGGCTCAAATTGCCAAGATGGAGGTCCAAGCAGAGATCAAGTCCCCTGCCAGTAAGTTCCACGAGGTCTGTAGCCGTAAAGTTTATCTCGTACCCAAGGCTTGCCCTGAAAAAATTAAGAGCATTGAAGTAGTTGAAGGTGACTGGAAGACTGTGGGCTCTGTCCAGCTTTGGACTTATTTCATCGGAGGAAATACCGAAGAGGCTAAGTTGGTGGTTGAAAGGGTAGACGAGGAAAACAAAACGGTCACTATGAACGTTGTGGAAGGAGATATCGTGAAGTATTTCAAGATCTTCAAGTGCACTATTCAAGTAACCGTAAAGGATAAGGGCAGCTTGGTGACATGGAGTGTGGAATATGAGAAGCTAAATGAGAGTGGCCCCGCTCCAGATGCTTACCTCAACTTTGCAATGGGTATCGTTGAGAACGTGGATGCTTACCTTCTCAAGGCATGA | 456 | 0.4583 | MAQIAKMEVQAEIKSPASKFHEVCSRKVYLVPKACPEKIKSIEVVEGDWKTVGSVQLWTYFIGGNTEEAKLVVERVDEENKTVTMNVVEGDIVKYFKIFKCTIQVTVKDKGSLVTWSVEYEKLNESGPAPDAYLNFAMGIVENVDAYLLKA* | 152 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vvi1g0500 | 151 | Pfam | Pathogenesis-related protein Bet v 1 family | 5 | 150 | IPR000916 | GO:0006952 | |
| Vvi1g0500 | 151 | Gene3D | - | 1 | 151 | IPR023393 | - | |
| Vvi1g0500 | 151 | PANTHER | POLYKETIDE CYCLASE/DEHYDRASE AND LIPID TRANSPORT SUPERFAMILY PROTEIN | 1 | 151 | - | - | |
| Vvi1g0500 | 151 | SMART | Bet_v_1_2 | 2 | 151 | IPR000916 | GO:0006952 | |
| Vvi1g0500 | 151 | CDD | Bet_v1-like | 6 | 148 | - | - | |
| Vvi1g0500 | 151 | SUPERFAMILY | Bet v1-like | 1 | 150 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vvi1g0500 | Vvi-Chr1 | 4742694 | 4743417 | Dispersed/Tandem |