Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0494 ATGGCTTCCACATCACCATGGAGATTGTCACGGAAGCCAAACACCGCCCACTCTGCCATATGCAATCCCTCGACCTTCAATTCTCTACACTGCTTTATTCACAGAAGAAGAAGAGCTCGTCTCACCACTTCCTCCCTGAAGGATTCTCAATCATCATCCTCATCCTCATCTTCATCCTCTTCTTTTTCTTGCACCCCTATCACTCCCAAAAGGAGACCGATAAAATCAGTTCAATTACCGGTGCTTCCTGATAACAAAAAACCCACTACATTTGGGCATAATGGTGCTACCAAGGTACCAACCTTAAGCCTGAAGTCCTTGTTCGGAAGGCGGTCTCTGTGGCGGAGGATCTTATTCGCGTCTAGAAAGGTCAGGGGCATCATTTTGCTCAATGTTCTCACTGTTGTCTATGCTAGTAATATTCCAGTTGTGAAAGAGGTTGAAGCAATCATGGACCCAGCAACCTTTGCTGCTGTGCGCTTTGTTGTGTCTGCCATACCATTTATCCCCTTTGTAGTACGAGCACGAGGTGATGTTCAGACCCGTAATGCGGGGATAGAGTTGGGTTTCTGGGTCAGTTTAGGATACCTTATGCAGTCACTTGGTCTGCTCACATCGGATGCTGGGCGAGCTTCATTTCTCTCTATGTTCACTGTAATTGTGGTTCCCTTGCTTGATGGTATGTTAGGAGCAACAGTTCCTGCTCATACCTGGTTTGGAGCTCTGATGTCCATCTTGGGGGTTGCTATGCTGGAGTCCAGTGGATCTCCTCCAAGTGTTGGAGATCTGTTAAACTTTTTAAGTGCAGTTTTTTTTGGTGTTCATATGCTAAGAACTGAACATATTTCAAGAAGTACAAGTAGAGAAAACTTCTTACCTCTCCTTGGTTACGAGGTATGCATCGTTGCTCTATTTTCAACCATCTGGTATTTTGTCGGAGGCTCGTTTGGTGCCATCCAAGAATGTGACCTGTCATCAGGGATGTGGACAATGTTGTGGGATTGGATGGTTGCATTTCCATGGATACCGGCATTTTACACAGGCATAATCTCTACTGGGTTATGCTTATGGATAGAGATGGATGCAATGCGTGATGTATCAGCCACAGAAACTGCAATAATTTATGGATTGGAGCCTGTCTGGGGTGCTGGTTTTGCATGGTTTCTCCTTGGTGAAAGATGGAGTTCCCTTGGCTGGATTGGGGCTGCTCTTGTGCTAGGTAAATTAACTTTTTGTCTTCTGGTTATCATTCATTACCACACTTTTCAATGCAGAATTGCCAAACTGGACCACAGCAGTCTTAATGTCTATTTTGGAAGTAATAGAATGGTGGTTATGGGGTCCCTCTATTTTTAG 1356 0.4484 MASTSPWRLSRKPNTAHSAICNPSTFNSLHCFIHRRRRARLTTSSLKDSQSSSSSSSSSSSFSCTPITPKRRPIKSVQLPVLPDNKKPTTFGHNGATKVPTLSLKSLFGRRSLWRRILFASRKVRGIILLNVLTVVYASNIPVVKEVEAIMDPATFAAVRFVVSAIPFIPFVVRARGDVQTRNAGIELGFWVSLGYLMQSLGLLTSDAGRASFLSMFTVIVVPLLDGMLGATVPAHTWFGALMSILGVAMLESSGSPPSVGDLLNFLSAVFFGVHMLRTEHISRSTSRENFLPLLGYEVCIVALFSTIWYFVGGSFGAIQECDLSSGMWTMLWDWMVAFPWIPAFYTGIISTGLCLWIEMDAMRDVSATETAIIYGLEPVWGAGFAWFLLGERWSSLGWIGAALVLGKLTFCLLVIIHYHTFQCRIAKLDHSSLNVYFGSNRMVVMGSLYF* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0494 451 PANTHER OS03G0707200 PROTEIN-RELATED 102 409 - -
Vvi1g0494 451 MobiDBLite consensus disorder prediction 44 67 - -
Vvi1g0494 451 SUPERFAMILY Multidrug resistance efflux transporter EmrE 329 406 - -
Vvi1g0494 451 MobiDBLite consensus disorder prediction 43 70 - -
Vvi1g0494 451 Pfam EamA-like transporter family 261 406 IPR000620 GO:0016020
Vvi1g0494 451 Pfam EamA-like transporter family 125 251 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0494 Vvi-Chr1 4717341 4720029 Dispersed/Wgd