Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0488 ATGCACCCATACAATAGGATACCCAGTAGCGGCCAATCTACTCCGTCGCCACCGCCCTCGCCGCTTCGTTCTCCCCGCCTCCGCCGCTCCAAGCAGGGGAGGTTTGCCGCTGGCCAGCAGCCCGGTCGGACCTTCGCCCAACGTCTTGCTTGGCTCATCCTATCGGTACTCCTCCGTCGCCAGGGGATTTTCCTCTTCGCTCCCCTCATCTACATCTCCGGCATGTTGCTTTACATGGGTACCGTCTCCTTCGACGTCGTTCCCGTCATCAAGCACCGCCCGGCTCCCGGCTCTGTCTACCGGAGCCCGCAGGTTTACGCCAAGCTCCGCCCCGAAATGGATTCTGATAATTCGACCAGCGATACGATATCGACTGTATGGAAACACTCTTACAAAAGCGGTGAGTGGCAACCGTGTGTAAACAGGTCCTCAGGAGGCTTACCCGAATCAAATGGTTACATATATGTTGAGGCAAATGGTGGCTTGAATCAGCAGAGAACATCGATAGGCAATGCAGTTGCTGTGGCGGGCTATCTTAATGCAACACTTATAATCCCCCATTTTCATTATCATAGCATTTGGAGAGATCCCAGCAAATTTAAAGACATTTACGATGAAGATTATTTTATTACTACATTGGAAAATGACGTACAGGTGGTCAACACAATTCCTGAATATATTATGGAACGATTTGACCACAATATGAGCAATGTTTACAACTTCAGAATAAAAGCATGGTCATCCATTCAGTATTATAGGGATGCAGTCCTCCCAAAGCTACTTGAAGAAAAGCTCATAAGGATTTCTCCTTTTGCGAATCGATTGTCATTTGATGCTCCTCCAGCAGTCCAACGGCTTAGATGCTTGGCTAATTATGAAGCTTTAAGGTTTTCAAGTCCCATATTAACTTTGGGTGAAAGTTTGGTTGCAAGAATGAAAAAACTGAGTGCAAACAACAGTGGCAGATACATTTCTGTGCACCTTCGGTTTGAGGAGGATATGGTTGCTTTCTCTTGTTGTGTATTTGATGGTGGAGAGGAAGAAATACAAGACATGAATGCAGCAAGGGAAAGAGGTTGGAGGGGAAAGTTTACAAAACCTGGTCGGGTTATACGACCTGGAGCAATCAGGATTAATGGAAAATGCCCTCTTACTCCTTTAGAGGTTGGCTTGATGCTTAGAGGAATGGGCTTTGATAAAAGCACATCTATCTATTTGGCATCTGGAAAGATATACAAATCTGAGAAAACTATGGCTCCGCTCTTCGAGATGTTTCCCCTTTTACAAACAAAAGAGATGTTGGCATCTGCTGAGGAACTTGCTCCGTTTAAGAACTATTCTTCCAGGATGGCTGCTATAGACTACACTGTTTGTCTTCACAGTGAAGTATTTGTGACAACTCAAGGTGGAAACTTCCCTCATTTTCTAATGGGCCACAGAAGGTACCTGTATGGAGGACACTCCAAAACAGTTAGGCCGGACAAGCGAAAGTTAGCATTACTGTTTGACAATCCTAATATTGGATGGAAATCCTTCAAGCGGCAAATGTTGAATATGCGAGCTCATAGTGATGCCAAGGGATTTGAGCTCAAAAGACCGAACGATTCCATATATACATTCCCATGCCCAGATTGCATGTGCCGGATGAATAAATCAGAAGATTCAAGATCATCATCAGCGACATGA 1686 0.4543 MHPYNRIPSSGQSTPSPPPSPLRSPRLRRSKQGRFAAGQQPGRTFAQRLAWLILSVLLRRQGIFLFAPLIYISGMLLYMGTVSFDVVPVIKHRPAPGSVYRSPQVYAKLRPEMDSDNSTSDTISTVWKHSYKSGEWQPCVNRSSGGLPESNGYIYVEANGGLNQQRTSIGNAVAVAGYLNATLIIPHFHYHSIWRDPSKFKDIYDEDYFITTLENDVQVVNTIPEYIMERFDHNMSNVYNFRIKAWSSIQYYRDAVLPKLLEEKLIRISPFANRLSFDAPPAVQRLRCLANYEALRFSSPILTLGESLVARMKKLSANNSGRYISVHLRFEEDMVAFSCCVFDGGEEEIQDMNAARERGWRGKFTKPGRVIRPGAIRINGKCPLTPLEVGLMLRGMGFDKSTSIYLASGKIYKSEKTMAPLFEMFPLLQTKEMLASAEELAPFKNYSSRMAAIDYTVCLHSEVFVTTQGGNFPHFLMGHRRYLYGGHSKTVRPDKRKLALLFDNPNIGWKSFKRQMLNMRAHSDAKGFELKRPNDSIYTFPCPDCMCRMNKSEDSRSSSAT* 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0488 561 PANTHER O-FUCOSYLTRANSFERASE FAMILY PROTEIN 54 558 IPR024709 -
Vvi1g0488 561 Pfam GDP-fucose protein O-fucosyltransferase 153 483 IPR019378 -
Vvi1g0488 561 CDD O-FucT_plant 153 490 IPR024709 -
Vvi1g0488 561 PIRSF UCP009360 25 551 IPR024709 -
Vvi1g0488 561 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0488 Vvi-Chr1 4666066 4672105 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g0488 126 553 Miscellaneous Gene Families AT1G22460 38.530 3.41e-92 292