Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0485 ATGGGGAAGGCCAAGAATCCAGATCCTCCGAACTACAAGAAGTACGGTGTCCCTTTGTATGGAGCTGCGTGGGCGCCGTCCACCATCATCAACGACGCTCCCCAACCCCTCGATCAAAAGCAAGAAGCTGATGAAGTTTCGGGAGAGGGATCCACGCCGTCGCCCGCTGCTCCAACCTATCTAGTTTTCTGCGGCGGTGGGGGCGAAGGCCGCAGCGGCATCCCCAACGCTCTTCTTCTCGCTGAATTCGATTTCGCCTCCAATTCTCTCTCCGATATGCCCGTGTTTAAACTTGGAATAGGTGCTGATTTACCTTATAGAATGGCTGTGCATCCAGGTGGAGAAGGTCTTATCTGTTCGTTGCCAAAAAGTTGCAAATGGTTTCAGTGGGATGAAATTAAGACTGAGGAAGTCCATAAACAGGGTTTAAAACTTTCTGAGAAAGTTCTCACCCACTTGGAAGACGTTGGACAACAGTTAGCACTGACATTCAATAATGATGGTTCAATGCTTGCTGTTGGTGGCGAGGACGGCAATTTAAGGGTGTTCAAGTGGCCTAGCATGGAAAATGTTCTCAGTGAGGCTCAAGCTCATGCAACCGTGAAGGATTTTGATTTCAGTCCTGATGGAAAATTTCTCGTCTCCTTGGGATCTGGTGGTCCTGGTAGGGTTTGGGATCTAACATCATCAACGGCTATAGCTTCACTACCCAAGGAAAATGATGAGGTTTTTGCATTCTGCAGATTTTCTCAAACTAACGTCAAGAATCAGGTTCTGTATATTGCTGCAGTTCGAGACCGAGGTGCATGCATTGTGACATGGAACACCACCACATGGAAGAAGGTGGGATCAAAGCAAATAGTCCGTGACTCAATTTCTGCTTTCAGTGTTTCAGCTGATGGAAAGCTCCTTTCAGTTGGGACAATCCAGGGAGACATTGTGATTGTGAATTCTGCAAGTATGCAGGTGCAGGCAGTGGTTAGAAAAGCACACCTTGGCATAGTGACAACAATGAGGTTCTCCCAAGATTCAAGGGCTTTGGTCTCTGCATCCATGGATTCCAGTGCAAGGGTGACAGTAATCAAGGAGATGAAGAAAAATGGATTTAGCTTATGGATCATTATCTTCATCATCATAGTTGCAATTGCTGCGTACCTCATGAAGACCAAAGGGATTGTTCCTTAA 1185 0.4675 MGKAKNPDPPNYKKYGVPLYGAAWAPSTIINDAPQPLDQKQEADEVSGEGSTPSPAAPTYLVFCGGGGEGRSGIPNALLLAEFDFASNSLSDMPVFKLGIGADLPYRMAVHPGGEGLICSLPKSCKWFQWDEIKTEEVHKQGLKLSEKVLTHLEDVGQQLALTFNNDGSMLAVGGEDGNLRVFKWPSMENVLSEAQAHATVKDFDFSPDGKFLVSLGSGGPGRVWDLTSSTAIASLPKENDEVFAFCRFSQTNVKNQVLYIAAVRDRGACIVTWNTTTWKKVGSKQIVRDSISAFSVSADGKLLSVGTIQGDIVIVNSASMQVQAVVRKAHLGIVTTMRFSQDSRALVSASMDSSARVTVIKEMKKNGFSLWIIIFIIIVAIAAYLMKTKGIVP* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0485 394 ProSiteProfiles Trp-Asp (WD) repeats profile. 201 235 IPR001680 GO:0005515
Vvi1g0485 394 SMART WD40_4 320 360 IPR001680 GO:0005515
Vvi1g0485 394 SMART WD40_4 188 226 IPR001680 GO:0005515
Vvi1g0485 394 SMART WD40_4 278 317 IPR001680 GO:0005515
Vvi1g0485 394 SMART WD40_4 146 184 IPR001680 GO:0005515
Vvi1g0485 394 MobiDBLite consensus disorder prediction 31 54 - -
Vvi1g0485 394 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 53 358 IPR011047 -
Vvi1g0485 394 FunFam SEC12-like protein 2 53 365 - -
Vvi1g0485 394 PANTHER PROLACTIN REGULATORY ELEMENT BINDING PROTEIN 11 389 IPR045260 GO:0005085
Vvi1g0485 394 Gene3D - 53 366 IPR015943 GO:0005515
Vvi1g0485 394 Pfam WD domain, G-beta repeat 152 183 IPR001680 GO:0005515