Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0475 ATGATTTCGTGGAACGATCTTTACGTCGTTTTGACGGCGGTGATTCCTCTCTACGTCGCTATGATTTTAGCTTATGGCTCCGTTCGCTGGTGGAAAATCTTCTCGCCCGACCAATGTTCCGGCATCAACCGCTTCGTGGCCATTTTTGCTGTTCCGCTGCTCTCTTTCCATTTCATCTCTCAAAACAATCCCTACGCAATGAACTTCCGGTTTATCGCTGCCGACACGCTTCAGAAGATCATCATGCTCGTCGTGCTTGGCATATGGACTAACTTCACCAAGAATGGAAGCCTGGAGTGGATGATTACCATATTCTCACTTTCTACGCTTCCAAACACATTGGTCATGGGTATTCCACTCTTGATCGCCATGTATGGGCCATACTCCGGTAGTCTGATGGTGCAGGTTGTGGTGTTGCAGTGCATCATTTGGTACACCCTTCTCCTCTTTCTCTTCGAGTACCGTGGCGCCAAGATGCTGATCATGGAGCAGTTCCCCGAGACTGCCGCATCCATTGTTTCCTTCAAGGTGGACTCAGACGTCGTTTCCCTCGACGGTCGGGACTTTCTTCAGACAGACGCCGAAATCGGCGATGACGGCAAGCTTCACGTGACGGTAAGGAAGTCCAACGCGTCGAGACGCTCTCTCGGGCCATGTTCTCTTCCTGCATTGACGCCTCGCCCCTCCAATCTCACCGGCGCAGAGATCTACAGCTTGAGTTCATCCAGAAACCCTACGCCAAGGGGTTCCAATTTCAACAATTCAGACTTTTATTCTATGATGGGGGTCCCAGGGTTTCCGGGAAGGCCATCGGCGGACCTGTACTCGATGCAATCGTCGAGGGGTCCGACGCCGAGACCCTCGAATTTCGAGGAGAACTGTGCTCCGGGAGCTCAAGCTATCAGCTCTCCCAGGTTTGGATTCTACCCAGCCAATTCTTACCCAGCACCCAATCCAGAAATTTCTGCCACAGTTACTAAGAACGCAAAGAACCATCTCCACCACCACCAGCCGCAACAGACTCAAAATCAACAACAGCAGCCGCAACCCCAAAGCAAAGCGAACCACGACGCCAAAGAGCTCCACATGTTCGTATGGAGTTCGAGCGCATCGCCGGTGTCGGAAGGTGGCGGACTCCATGTGTTTGGCGGAACCGATTTCGGCGCGGCGGAGCAATCTGGACGGTCCGATCAGGGCGCTAAGGAGATCAGGATGTTGGTTGCTGATCACCCTCCTCACCCCCAAAATGGGGAAAGCAAAGCTATTCCGGAAGCCGAGGACTTTGGTGGAGAAGACTTCACCTTTGTTGGAAATAGAGGAGTGGAGGGAGAAGAGGAGAGGGAGAAGGAGGGACCCATTGGACTGTCCAAGCTGGGGTCAAGCTCCACCGCTGAGCTACACCCAAAAATGTTGGGAGCTCCAGAGTCCGGTGCCGGCAAACAGATGCCTCCGGCCAGTGTGATGACCCGTCTCATCTTGATCATGGTGTGGCGCAAGCTTATCCGCAACCCCAACACCTACTCAAGCCTCATTGGTCTGGTTTGGTCTCTCATTGCTTACCGGTGGGATGTGGCTATGCCCACAATCATAAAGCAGTCCATCTCTATACTGTCGGATGCTGGTCTTGGAATGGCTATGTTCAGCTTAGGTCTGTTTATGGCCCTGCAACCAAGGATAATCGCATGCGGTAACTCGGTGGCTACATTCGCCATGGCTGTGAGATTCCTAACTGGCCCAGCAGTAATGGCTGCAGCTTCCATTGCTGTTGGCCTGCGGGGCACCCTCCTCCATGTTGCCATCGTGCAGGCTGCACTTCCACAGGGCATTGTTCCCTTTGTGTTCGCCAAAGAGTACAACGTTCATCCAGCTATTCTCAGCACTGCGGTGATCTTTGGGATGCTAATAGCGTTACCGATTACCCTCGTCTACTACATCCTTCTGGGATTGTGA 1950 0.5292 MISWNDLYVVLTAVIPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFISQNNPYAMNFRFIAADTLQKIIMLVVLGIWTNFTKNGSLEWMITIFSLSTLPNTLVMGIPLLIAMYGPYSGSLMVQVVVLQCIIWYTLLLFLFEYRGAKMLIMEQFPETAASIVSFKVDSDVVSLDGRDFLQTDAEIGDDGKLHVTVRKSNASRRSLGPCSLPALTPRPSNLTGAEIYSLSSSRNPTPRGSNFNNSDFYSMMGVPGFPGRPSADLYSMQSSRGPTPRPSNFEENCAPGAQAISSPRFGFYPANSYPAPNPEISATVTKNAKNHLHHHQPQQTQNQQQQPQPQSKANHDAKELHMFVWSSSASPVSEGGGLHVFGGTDFGAAEQSGRSDQGAKEIRMLVADHPPHPQNGESKAIPEAEDFGGEDFTFVGNRGVEGEEEREKEGPIGLSKLGSSSTAELHPKMLGAPESGAGKQMPPASVMTRLILIMVWRKLIRNPNTYSSLIGLVWSLIAYRWDVAMPTIIKQSISILSDAGLGMAMFSLGLFMALQPRIIACGNSVATFAMAVRFLTGPAVMAAASIAVGLRGTLLHVAIVQAALPQGIVPFVFAKEYNVHPAILSTAVIFGMLIALPITLVYYILLGL* 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0475 649 NCBIfam auxin efflux carrier 1 649 IPR014024 -
Vvi1g0475 649 MobiDBLite consensus disorder prediction 335 354 - -
Vvi1g0475 649 Pfam Membrane transport protein 10 644 IPR004776 GO:0016020|GO:0055085
Vvi1g0475 649 MobiDBLite consensus disorder prediction 269 297 - -
Vvi1g0475 649 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 649 - -
Vvi1g0475 649 MobiDBLite consensus disorder prediction 330 356 - -
Vvi1g0475 649 MobiDBLite consensus disorder prediction 440 460 - -
Vvi1g0475 649 MobiDBLite consensus disorder prediction 273 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0475 Vvi-Chr1 4475564 4478310 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g0475 1 649 Organic Solute Cotransporters AT1G70940 76.702 0.0 954