Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vvi1g0474 | ATGGCAGGAGAGATCGAAGAGCCGTTTAGCCTTAACTTTCAGGCAGATTCCTTGCACTCAGGCTCTATTTCATTTGGAAGGTTTGAAACTGAATCATTATCTTGGGAAAGGAGGTCCTCCTTCTCACATAATAGATATCTTGAAGAAGTTGAAAAATACTCGAAACCAGGTTCAGTTACTGAGAAGAAAGCTTATTTTGAAGCTCACTTCAAGAAGAGAGCTCTTCTTAGTCAGAGTTTATCCGAGTGCCAAACTGGGACTGAATACCAAACCAGTGAAAATGATGTTATGGAGAACATAGGTTACAGAGAAGACTTTGAGCATGAGGAAGGTATCCACTTTGCTAACTTTGATGGGAGTCCTGGTGGCTCAGGTCATCATGGAGACTGTGAGGTGACAGAATGTGAAAGACAGGATACAGTAATCTCACATTCTGAGTTTCATGTGGAGCTTGCTTTCAACAATACCAATGTTGTTGAGGACAATGTTTTTAAACAGGTTGAGCCTGAGGAGACACGTCAAACTGAAGCTGGATGCAACAAATCACTTCTTGTTAATGCTGAACCCAAGATAGAAGTAAAACAGGGCCTCCATGGTGAAGTTTTAAATGTAGATGAACTATCAAAAGCCATCAATCTGTCTCCTAATACTCAGAGAACAGGGAAAGATGATAGTACTAGTTTTGAATGTCAGCTAAATGCTTCTCCAAAGGTGAGGAGTACAAAAGAAAGCAAACCTACCAAGGACAGATTGAAGTCTCAGATCAATGGTACTCAGGTTCAGAGAAATATTTCCAATCAGGCATCTAAAGATTCTGCAAAAATTCCAAGTAGAAGGGGAAGAGAGAGTCCACAGAGGACAAAAGTAGAAAAGCTGTCGGCACACACCACCATTTCAACTACTCATTCAACATGCAGAACTCTAAAATCAGAGGATTCTGAGTGTTCTTCAAAGGCAAAAATCATTCAAGAGAATAGAAGCAATGAAAGGGAATTAAGGACAAAGAAAGGAATTGAAACCCAAACTTCTGCATCAGAGAAGGTTGAACCAGGAGGACGTCAAACATCATACAGGCCCAAGCGAAATGTTAATTTGAGTAAAGCAGATATGAAATCAAATCCTGCGGTTTTCAATTTCAGAAGTGATGAACGAGCAGAGAGGAGGAAAGAGTTTTTTATGAAGTTGGAGAAAAAAATGCATGCTAAGGAGGCTGAGATGAACCAGATTCAAGCAAAGACACAGGAGAAGACAGAAGCTGAGATTAGACAATTTCGGAGAAGTCTCAACTTTAAAGCAACGCCAATGCCATCTTTCTATCATGATTCTGTATCACCAGCACCAGATGGAAACAATGCTGTCTCAATTAACAAATCAACTAAGCGACAGATCAAGTCATCAAGTGCAGGGGGTAGAGCTGCTGCAGGATTCCCATTGTATCCAAATACAGGAATCGACCAAGTAGTATCTGCCAGTGAATCTGTAAACACAACTAATCCACCTCAAGTCACAAAAGCGATCATTCGGACTCCATCAGCCAACAGAAACAGGCCCCACCAAGCTGGGGTGAAAAATGAACTGGCAATGAAGAAAGAGCAAGAGAAGGATGCTAATGGGCAGAAACATAGAGTATCAGAAGTTAGTAAGGTGACAAAAGGGAGGGTTGAGGGAAAGCATAATGCAGGAGCTGGGAGAAGCAGCACTGGTATTGTAAGGAAAAATATGAAAGACATTGGCATCACTGTTTCAGGTATGCGTCATCTAGCAGTTGGTGTTGCATGGTGA | 1782 | 0.4136 | MAGEIEEPFSLNFQADSLHSGSISFGRFETESLSWERRSSFSHNRYLEEVEKYSKPGSVTEKKAYFEAHFKKRALLSQSLSECQTGTEYQTSENDVMENIGYREDFEHEEGIHFANFDGSPGGSGHHGDCEVTECERQDTVISHSEFHVELAFNNTNVVEDNVFKQVEPEETRQTEAGCNKSLLVNAEPKIEVKQGLHGEVLNVDELSKAINLSPNTQRTGKDDSTSFECQLNASPKVRSTKESKPTKDRLKSQINGTQVQRNISNQASKDSAKIPSRRGRESPQRTKVEKLSAHTTISTTHSTCRTLKSEDSECSSKAKIIQENRSNERELRTKKGIETQTSASEKVEPGGRQTSYRPKRNVNLSKADMKSNPAVFNFRSDERAERRKEFFMKLEKKMHAKEAEMNQIQAKTQEKTEAEIRQFRRSLNFKATPMPSFYHDSVSPAPDGNNAVSINKSTKRQIKSSSAGGRAAAGFPLYPNTGIDQVVSASESVNTTNPPQVTKAIIRTPSANRNRPHQAGVKNELAMKKEQEKDANGQKHRVSEVSKVTKGRVEGKHNAGAGRSSTGIVRKNMKDIGITVSGMRHLAVGVAW* | 594 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vvi1g0474 | 593 | MobiDBLite | consensus disorder prediction | 531 | 558 | - | - | |
| Vvi1g0474 | 593 | MobiDBLite | consensus disorder prediction | 274 | 289 | - | - | |
| Vvi1g0474 | 593 | MobiDBLite | consensus disorder prediction | 290 | 305 | - | - | |
| Vvi1g0474 | 593 | MobiDBLite | consensus disorder prediction | 324 | 342 | - | - | |
| Vvi1g0474 | 593 | MobiDBLite | consensus disorder prediction | 235 | 305 | - | - | |
| Vvi1g0474 | 593 | MobiDBLite | consensus disorder prediction | 251 | 273 | - | - | |
| Vvi1g0474 | 593 | Coils | Coil | 392 | 422 | - | - | |
| Vvi1g0474 | 593 | MobiDBLite | consensus disorder prediction | 324 | 359 | - | - | |
| Vvi1g0474 | 593 | MobiDBLite | consensus disorder prediction | 531 | 566 | - | - | |
| Vvi1g0474 | 593 | PANTHER | TPX2 (TARGETING PROTEIN FOR XKLP2) PROTEIN FAMILY-RELATED | 1 | 516 | IPR044216 | - | |
| Vvi1g0474 | 593 | Pfam | Targeting protein for Xklp2 (TPX2) domain | 377 | 445 | IPR027329 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vvi1g0474 | Vvi-Chr1 | 4447965 | 4454333 | Transposed |