Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0467 ATGGGAATACCTGATACTTCACTACTTGATTTGATAGAGAAGGTTGGGTCTTGGATTCCTTGGAGAGGAAGTCATCGGCCTTGTTTGTCTCGGGAAAACGAGATGCCTGGTAACAGTTGCAAAATGTGTTGCGGGTGTGATATAAAATTTTCAGAGTACTGGATTAGATATCACTGCCAAAGCTGTGGTCGGGTGCTGTGTGGGAAATGTTTGTGGGGCTTTGAATCTTATATTGTTGCATCCAGTGAAGAAAATATTAATTCCTGCAAGTTTTGTTCCGAGGTTAGTTTGAGGCGCGAAGGTGGGAGAAAGAATAGTGAGAAAATCCATCCTTCCGCCTCTCCTCGAGAAAGCCCTGAACCACCTTCTCCTTGTTTTGGTGGTGAAAAAACTGATGGTACTGTGAATAGTGAGTTGATTCACAGTGATCGGCTTGCCTGCTTTCTTGAAGCCCGGGATTATGGTTATTCTCCCCGTGCTGCAACCAGCAGCACTGTGACCTCTAACCATGGTTATCCATCTCCAGTGTCTGTTCGTCGCTTTTATAGCAGGAGTGATGAAGAAGAGGCTGAGGATTCTGGGAAGCACTTCTTCAGCCTGTCTGGTGAATATTATCAAGATAATTCAGATATAGATACAAGTAGTGTTAGTGCTAGACATGAGTTTTACAGTTTCAAGTCAGTGGGATCAAGTCCTTCAGACAGCCCCTCTAGGATTGATTTTACTTCTAATAGAGTTGGGCACTCTGTACAGCAAGAGAGAGAGAGAAGCCCAAGGGCTCCAAATGATGGTTCCTTTGTTCAAGATTCTATGGCTATTTTAAGAAGGCCTGGGGATGGGACTGAGGATCCAGAGAATACTGATGATTGCTCAGATGATTTGGCAATATTTCAGGACCAATGCGAGAAGCTGCAAAAGCCATTGGATTTTGAAAACAATGGTTTCATTTGGTTTCCTCCACCAGCAGATGATGAGGATGATGAGGAAGAGAACAATTTTTTTGAATATGACGATGAAGATGATGATATTGGAGAATCAGGAGCAATGTTCTCATCTAGTACTAGCCTTGCAAGTATGTTCCCAGCAAAGGAGAAGCAGAATGAGGGACACAAGGAGCCTCTGAGGGCTGTGGTCCAGGGGCATTTTAGGGCTCTTGTGTCACAGCTATTACAGGGAGAGGGTATCAAGGTGGGTAAAGAGGATAACATTGACGAGTGGCTCGACATTGTTGCAACAGTGGCTTGGCAGGCTGCAAATTTTGTGAAACCAGATACTAGTAGAGGAGGCAGTATGGATCCAGGAGCATATGTAAAGGTTAAGTGTATAGCATCAGGAAGTCCACATGAGAGCACCCTCGTTAAGGGAGTAGTTTGTACAAAAAACATTAAACACAAGCGCATGACTTCACAATACAAAACCCCTAGATTACTTATTTTAGGAGGAGCACTTGAGTACCAGCGAGTTCCGAACCAGTTGGCGTCTTTTAATACTCTACTGCAACAGGAAATGGATCATCTCAGGATGATTGTTTCAAAGATAGAGGCTCATCGCACAAATGTTCTTCTGGTAGAAAAAAGTGTATCTTCATATGCGCAAGAATATCTGCTGGAAAAGGATATTTCGTTAGTTTTAAATGTTAAAAGGCCATTACTGGAGCGCATAGCTCGATGCACTGGTGCTCTAATTACTCCATCAGTTGATGATATTTCTATGACACGATTGGGACACTGTGAACTCTTCCGAGTAGAGAGAGTGTCAGAAGAACTTGAGACTGCTAATCAATCCAACAAGAAACCATCTAAAACTTTGATGTTTTTTGAGGGTTGTCCAAGGCGTTTAGGTTGCACGGTCTTGCTGAAGGGTGCATGTCGTGAAGAACTGAAGAAAGTTAAGCATGTTGTTCAATATGCAGTGTTTGCAGCCTATCATTTATCCCTTGAGACTTCCTTCCTTGCTGATGAGGGTGCTAGTCTGCCCAAGATGACACTGAAACCCTCTATTACTATACCAGATAGGACAACTGCTGATAATGTCATTTCATCAATCCCTCATTCTGCTGCTTCTACCGTTTGTCAAGCAGCCATCGATGCCCCTGCTAGGGAGGAAGGATCTGTAGGTTTCAATACAGAACTTGGAGGATGTGAGTCCTCATCTGAGCATATTAATCCTGGTCCCATATCTCCTTTATCTCCTGACTCAATGGATGGTAGACTTGGAAATATACCCACTGATGCACACAATGATGATTTGGCATCCAGTGGGGGTCTGGAATCATATTCTTTGAAAAAATTCATGGATTTAAGGGGGGCCATTGTGCTTCCTGCTGATTTTAAAGATCATTCCCAACCTGACTTGCAGGATACCATGATTAAAGAGGAGATGCAACCTGGGGAAATTCATGAATTGGCCAAGCCTGAACAGGCTGATGAAAATGAAGTGTCAAGTGAATACTTCTCTGGCACTGACAGTCATCAGAGCATATTGGTGTCATTTTCAAGCCGTTCTGTGCGGACAGGAACTGTATGTGAACGCTCTAGACTTATGCGTATTAAGTTTTATGGCTGTTTTGACAAGCCTCTTGGAAGATATCTTCGTGATGATCTCTTTGATCAGACACCTTGCTGTTCATACTGTAGAGAGCCTGCTGATGCCCATGTCCAGTGTTATACCCATCAGCAAGGAAGTCTTACAATCAATGTAAAATGTCTTCCCTCCATGAAGCTACCCGGGGAGCGGGATGGAAAAATATGGATGTGGCATCGATGCCTAAGATGTGCCCAAATAGATGGAGTTCCACCAGCAACTCGTAGGGTGTTTATGTCTGATGCTGCATGGGGACTTTCTTTTGGAAAGTTCTTGGAGCTTAGCTTTTCAAACCATGCAACTGCTAATCGTGTTGCAACTTGTGGTCATTCTTTACAAAGGGACTGCCTCCGTTTCTATGGGTTTGGGAGTATGGTTGCATTCTTTCGCTATTCCCCCATTGATATTCTGTCTGTCCATTTGCCCCCAGCAATGCTTGAATTCAATGGCCAGGTTCAACAAGAGTGGATAAGAAAAGAGGCTTCAGAGCTTTTGAGTAAAATAGAAACTGTGTATGTGAAGATATCTGATGTGCTCGATAGAATTGAACAGAAAACTACATCTTTCAGAAATGAATCTTCAGATAAAAGTGAGTTGCATAACCATATCATGGACCTGAAAGATCTGCTGAATAGGGAAAGAAATGATTACAACAATTTGCTGCAACCATCTGGTGTAGGAGCTTCACCATCAGGTCAAGTGGCAGTAGACATTCTGGAACTCAACTGCTTGAGACGTTCTCTCCTCATTGGTTCACATGTTTGGGATCAGCGGCTCAGTTCATTGGATTCTCTCCTTGAAACAAGGATTTCTATTTCCAAGAACAAACAGGGGGAGGCATCTCATGCTGAAATGAAGGGCTGTAGTACTGATTCATTTCTCATGAATAGCAAGCTTGACCATTATCATGAAGAAAATGTTACCCAGTCTTCAAAAATACAGGATTCCCACAGGAATGATATGCTGTTGGAGCACAAGGAAGAGATTAATCCATCATTATTTGAGCCCCAGGTTCCTGAAAATTCTATGTTAACCTCAGGTCATGATAACAGAAAGGAGGAAGCATATGTGGATGAAAAAAACAAAACACTTTTGGAAAGCATCCCATCCCCTGCATCCAATCTGTCTGACAAGATAGATTCTGCATGGACAGGCACAGATCAACTTCTGATGAAACCTCAGTTTGTTCATACGCTACATGCAGATGGGAACCAGGCTGGTTCTGTCAGGCAAATAAACCAAATAGATACTCCACCTTTTAGAAGGCCAATGTCACCAGTGAGAGTCTATTCCTTTGATTCTGCAGTAAGAGTTCAGGAAAGAATCCGGAAAGGATTGCCCCCCTCTTCTTTGCATCTGTCTACGCTTAGGTCCTTCCATGCTTCTGGTGACTATAGGAATATGGTCAGGGATCCTGTTTCTAGTGTAATGAGGACTTACTCTCAATTATCTCCCCGGGAAGCACAAAAGGTAGGTTCAACATCCTCATTCTTCTCCTCATCTCATGTGGCTGAAGGGGCCAGGCTGCTCCTTCCGCAAACAGGCCACGGTAATTTAGTTATTGCTGTTTATGACAATGAACCCACTAGCATAATATCATATGCCCTTAGTTCCAAGAAGTATGAGGACTGGGTTGCTGATAAGTTAAATGAGCATGAAGGAGGTTGGAGTGCCAACGAAAGCAATAAAGAAGATTCTTCAGTTTCCACCTCGGCTTGGTCGTCTTTTGGCCCTCTAGACTTGGATTATATCCATTATGGAAGTTATGGGTCTGAAGATTCTTTATCAGCAGTGGGGACCCTGTTTACAGACACCAAAAAATCTCCTCACCTAAGAATTTCCTTTGGGGATGAGTCTTCAAATGCTGGAGGCAAAGTTAAGTTTTCTGTCACCTGTTATTTTGCAAAGCAGTTTGACACACTTAGAAAGAAATGCTGCCCTAATGAAGTGGATTTTGTACGTTCCTTAAGCCGTTGCAAAAGGTGGAGCGCGCAAGGGGGAAAGAGCAATGTGTATTTTGCTAAGTCATTGGATGAGAGATTCATTATAAAACAAGTCACGAAAACAGAGTTGGTTTCTTTTGAAAAATTTGCACACGAGTACTTCAAATATTTGACACATTCTCTTAGCTCAGGAAGCCCAACTTGCCTTGCTAAAATTCTTGGTATTTATCAGGTCACTGTCAAAAATCTGAAAGGTGGAAAGGAAACAAAAATGGATTTGATGGTGATGGAGAACCTTTTTTTCAAGAGAAATATCTCAAGAGTCTATGATCTTAAGGGTTCTGCACGATGTCGCTACAATGCAGATACAACCGGGGCGAACAAAGTATTGCTAGATACGAATCTACTGGAAACACTATGTACAAAACCCATATTTCTTGGAAGCAAAGCGAAGAGAAGCCTAGAGAGAGCTATTTGGAACGATACATCCTTTTTGGCGTCTGTTGACGTCATGGACTATTCACTGTTGGTTGGGGTGGACAATGAGCGCAAAGAACTGGTTTTAGGGATCATTGATTTCATGAGGCAGTATACATGGGACAAGCACTTGGAGACATGGGTGAAGGCATCAGGTATACTTGGTGGTCCAAAGAATGCTCCGCCAACTATTATTTCTCCCATACAATACAAGAGAAGATTCAGGAAAGCAATGACTACATATTTTCTGGCAGTACCTGATCAATGGTCTTCCTGA 5280 0.4278 MGIPDTSLLDLIEKVGSWIPWRGSHRPCLSRENEMPGNSCKMCCGCDIKFSEYWIRYHCQSCGRVLCGKCLWGFESYIVASSEENINSCKFCSEVSLRREGGRKNSEKIHPSASPRESPEPPSPCFGGEKTDGTVNSELIHSDRLACFLEARDYGYSPRAATSSTVTSNHGYPSPVSVRRFYSRSDEEEAEDSGKHFFSLSGEYYQDNSDIDTSSVSARHEFYSFKSVGSSPSDSPSRIDFTSNRVGHSVQQERERSPRAPNDGSFVQDSMAILRRPGDGTEDPENTDDCSDDLAIFQDQCEKLQKPLDFENNGFIWFPPPADDEDDEEENNFFEYDDEDDDIGESGAMFSSSTSLASMFPAKEKQNEGHKEPLRAVVQGHFRALVSQLLQGEGIKVGKEDNIDEWLDIVATVAWQAANFVKPDTSRGGSMDPGAYVKVKCIASGSPHESTLVKGVVCTKNIKHKRMTSQYKTPRLLILGGALEYQRVPNQLASFNTLLQQEMDHLRMIVSKIEAHRTNVLLVEKSVSSYAQEYLLEKDISLVLNVKRPLLERIARCTGALITPSVDDISMTRLGHCELFRVERVSEELETANQSNKKPSKTLMFFEGCPRRLGCTVLLKGACREELKKVKHVVQYAVFAAYHLSLETSFLADEGASLPKMTLKPSITIPDRTTADNVISSIPHSAASTVCQAAIDAPAREEGSVGFNTELGGCESSSEHINPGPISPLSPDSMDGRLGNIPTDAHNDDLASSGGLESYSLKKFMDLRGAIVLPADFKDHSQPDLQDTMIKEEMQPGEIHELAKPEQADENEVSSEYFSGTDSHQSILVSFSSRSVRTGTVCERSRLMRIKFYGCFDKPLGRYLRDDLFDQTPCCSYCREPADAHVQCYTHQQGSLTINVKCLPSMKLPGERDGKIWMWHRCLRCAQIDGVPPATRRVFMSDAAWGLSFGKFLELSFSNHATANRVATCGHSLQRDCLRFYGFGSMVAFFRYSPIDILSVHLPPAMLEFNGQVQQEWIRKEASELLSKIETVYVKISDVLDRIEQKTTSFRNESSDKSELHNHIMDLKDLLNRERNDYNNLLQPSGVGASPSGQVAVDILELNCLRRSLLIGSHVWDQRLSSLDSLLETRISISKNKQGEASHAEMKGCSTDSFLMNSKLDHYHEENVTQSSKIQDSHRNDMLLEHKEEINPSLFEPQVPENSMLTSGHDNRKEEAYVDEKNKTLLESIPSPASNLSDKIDSAWTGTDQLLMKPQFVHTLHADGNQAGSVRQINQIDTPPFRRPMSPVRVYSFDSAVRVQERIRKGLPPSSLHLSTLRSFHASGDYRNMVRDPVSSVMRTYSQLSPREAQKVGSTSSFFSSSHVAEGARLLLPQTGHGNLVIAVYDNEPTSIISYALSSKKYEDWVADKLNEHEGGWSANESNKEDSSVSTSAWSSFGPLDLDYIHYGSYGSEDSLSAVGTLFTDTKKSPHLRISFGDESSNAGGKVKFSVTCYFAKQFDTLRKKCCPNEVDFVRSLSRCKRWSAQGGKSNVYFAKSLDERFIIKQVTKTELVSFEKFAHEYFKYLTHSLSSGSPTCLAKILGIYQVTVKNLKGGKETKMDLMVMENLFFKRNISRVYDLKGSARCRYNADTTGANKVLLDTNLLETLCTKPIFLGSKAKRSLERAIWNDTSFLASVDVMDYSLLVGVDNERKELVLGIIDFMRQYTWDKHLETWVKASGILGGPKNAPPTIISPIQYKRRFRKAMTTYFLAVPDQWSS* 1760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0467 1759 FunFam 1-phosphatidylinositol 3-phosphate 5-kinase isoform X1 448 621 - -
Vvi1g0467 1759 SUPERFAMILY SAICAR synthase-like 1480 1750 - -
Vvi1g0467 1759 PANTHER 1-PHOSPHATIDYLINOSITOL 3-PHOSPHATE 5-KINASE-RELATED 29 1758 - -
Vvi1g0467 1759 SMART PIPK_2 1462 1751 IPR002498 GO:0016307|GO:0046488
Vvi1g0467 1759 ProSiteProfiles Zinc finger FYVE/FYVE-related type profile. 37 94 IPR017455 -
Vvi1g0467 1759 MobiDBLite consensus disorder prediction 103 128 - -
Vvi1g0467 1759 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 1430 1750 IPR002498 GO:0016307|GO:0046488
Vvi1g0467 1759 MobiDBLite consensus disorder prediction 226 265 - -
Vvi1g0467 1759 Gene3D - 1608 1751 - -
Vvi1g0467 1759 Pfam TCP-1/cpn60 chaperonin family 402 644 IPR002423 GO:0005524
Vvi1g0467 1759 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 1454 1607 IPR027484 -
Vvi1g0467 1759 MobiDBLite consensus disorder prediction 226 248 - -
Vvi1g0467 1759 Gene3D GroEL 448 621 IPR027409 -
Vvi1g0467 1759 FunFam Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C 1440 1607 - -
Vvi1g0467 1759 SUPERFAMILY FYVE/PHD zinc finger 35 98 IPR011011 -
Vvi1g0467 1759 CDD Fab1_TCP 383 655 - -
Vvi1g0467 1759 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 1526 1692 IPR002498 GO:0016307|GO:0046488
Vvi1g0467 1759 FunFam 1-phosphatidylinositol 3-phosphate 5-kinase FAB1 1609 1751 - -
Vvi1g0467 1759 CDD PIPKc_PIKfyve 1487 1750 IPR044769 GO:0000285
Vvi1g0467 1759 SUPERFAMILY GroEL apical domain-like 449 621 IPR027409 -
Vvi1g0467 1759 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 35 96 IPR013083 -
Vvi1g0467 1759 CDD FYVE_like_SF 42 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0467 Vvi-Chr1 4368625 4384287 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g0467 1 1759 Acyl Lipid Metabolism Gene Families AT1G71010 55.332 0.0 1774