Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0459 ATGACTAAAGATGAAGACTTTAAGCTCCTCAAGATCCAGACTTGTGTTCTCAAAGTGAACATACACTGTGATGGCTGTAAGCAGAAAGTGAAGAAACTTCTTCAGAGAATTGAAGGTGTGTACACAGTTAATATAGATGCAGAACAGCAGAGAGTCACAGTTTCAGGAAGTGTGGACTCTGGAACTTTGATAAAGAAACTGGTCAAAGCTGGTAAACATGCCGAGCTTTGGTCTCAGAAAAGCAACCAAAACCAAAAACAAAAAACCAACTGCATCAAAGATGACAAGAACAACAAAGGCCAAAAGCAAGGTTTGATCAAGGGACTTGAGGCCTTCAAAACCCAGCAAAAGTTCCCTGTTTTCAGCTCTGAAGAAGATGAAGATGATTTTGATGATGATGAAGAAGACTATGAAGAAGAAGAGCTTCGGTTTCTCCAGGAGAAAGCGAACCAACTTAGTCTGCTCCGGCAGCAAGCTCTTGATGCAAGCAATGCAAAGAAAGGTTTTGGAGCCATTGCTGCTTCCAACAATGGCAAGATCAACAATAATGTAGGAAATGGAAATGTCCAAAAGAAAGGAAACCCCAATCAGAATATGGGAATGAAGGGTAGTCCAGGTGGAATTGATCAGAAAACCATAGCAGCTCTGAAAATGAACAACCCCCATTTGGTGGGCGGCGGAAATATTAATTCTGGAGAAGTTAAAAGGGGAAATGACATCAATTCCATGATGGGTCTTGGTGGGTTTCATGGAAATGGTGGTAACGTTGCCGCCACTGCTGCTGCTTTAGGTGGAAATTCCAATGCTTTGGGAGGGTTTCAAATTCAACCCAACAATGGGTTTCAGGGGTCTTCCACAGGGTTCCCAAATGGTGGATTTGCAACAGGTCATCATCATCCATCACCCATGCTGATGAATCTAAATGGGAACCAGTACAACCATCCATCACAAATGATGATGAACATGAACATGCAGCAGAACAGGCATGCCCCCATGCAGCAACCCCAGATGATGTATCACAGGTCTCCGTTTATTCCGCCCAGCACCGGTTACTACTATAACTACAGCCCTGCCCTCTCCCCCTACACTCACTGTGACACTAATTATAGCGGTGATCACTCTGCAAGCCATATGTTCAGTGATGAGAACACAAGCAGCTGTTCAATCATGTAA 1173 0.4373 MTKDEDFKLLKIQTCVLKVNIHCDGCKQKVKKLLQRIEGVYTVNIDAEQQRVTVSGSVDSGTLIKKLVKAGKHAELWSQKSNQNQKQKTNCIKDDKNNKGQKQGLIKGLEAFKTQQKFPVFSSEEDEDDFDDDEEDYEEEELRFLQEKANQLSLLRQQALDASNAKKGFGAIAASNNGKINNNVGNGNVQKKGNPNQNMGMKGSPGGIDQKTIAALKMNNPHLVGGGNINSGEVKRGNDINSMMGLGGFHGNGGNVAATAAALGGNSNALGGFQIQPNNGFQGSSTGFPNGGFATGHHHPSPMLMNLNGNQYNHPSQMMMNMNMQQNRHAPMQQPQMMYHRSPFIPPSTGYYYNYSPALSPYTHCDTNYSGDHSASHMFSDENTSSCSIM* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0459 390 MobiDBLite consensus disorder prediction 76 99 - -
Vvi1g0459 390 Pfam Heavy-metal-associated domain 17 73 IPR006121 GO:0046872
Vvi1g0459 390 SUPERFAMILY HMA, heavy metal-associated domain 12 78 IPR036163 GO:0046872
Vvi1g0459 390 MobiDBLite consensus disorder prediction 182 201 - -
Vvi1g0459 390 ProSiteProfiles Heavy-metal-associated domain profile. 12 75 IPR006121 GO:0046872
Vvi1g0459 390 CDD HMA 16 75 IPR006121 GO:0046872
Vvi1g0459 390 Coils Coil 142 162 - -
Vvi1g0459 390 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 33-RELATED 6 390 - -
Vvi1g0459 390 FunFam Copper transport protein ATOX1 11 80 - -
Vvi1g0459 390 Gene3D - 12 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0459 Vvi-Chr1 4243475 4245441 Dispersed/Wgd