Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0458 ATGGGTGCACTGGACTATTTTTCAAACTTATGTACTGTTACCAGCACAAGGAAGAGCAAACGTAAACCAATGCAGACAGTTGATATCAAGGTGAAAATGGACTGTGATGGTTGTGAAAGGAGAGTAAAGAATGCTGTTTCCTCCATGAAAGGTGTGAAAACAGTGGATATAAACCGAAAGCAAAGCCGGGTAACAGTCAGTGGTTTTGTTGATCCAAACAAGGTGTTAAAGAGGGTGAAAAGCACGGGAAAGAGAGCTGAGTTTTGGCCCTATGTCCCTTACAATCTAGTGTATTACCCTTACATTAAAGAGGCCTATGACAAGAAGGCACCGTCTGGCTACGTGAAGAATGTGGTTCAAGCACTCCCCAGCCCAAGTGCCACTGACGAGAGGCTCACCACCCTCTTTAGTGACGACAACCCCAACGCATGCTCCATCATGTAA 444 0.4527 MGALDYFSNLCTVTSTRKSKRKPMQTVDIKVKMDCDGCERRVKNAVSSMKGVKTVDINRKQSRVTVSGFVDPNKVLKRVKSTGKRAEFWPYVPYNLVYYPYIKEAYDKKAPSGYVKNVVQALPSPSATDERLTTLFSDDNPNACSIM* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0458 147 ProSiteProfiles Heavy-metal-associated domain profile. 24 87 IPR006121 GO:0046872
Vvi1g0458 147 PANTHER COPPER TRANSPORT PROTEIN ATOX1-RELATED 26 145 IPR045181 GO:0046872
Vvi1g0458 147 Gene3D - 22 87 - -
Vvi1g0458 147 SUPERFAMILY HMA, heavy metal-associated domain 23 90 IPR036163 GO:0046872
Vvi1g0458 147 FunFam Heavy metal-associated isoprenylated plant protein 26 13 89 - -
Vvi1g0458 147 Pfam Heavy-metal-associated domain 30 84 IPR006121 GO:0046872
Vvi1g0458 147 CDD HMA 33 87 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0458 Vvi-Chr1 4233246 4234848 Dispersed/Wgd