Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0457 ATGTCCCTCACCCTCGAACTCGTCTCTCAGACCCTACTTCCCAAATCGCCGTCGGCCACCTTGTTCGCTGCTTCCGACGCCGCATTTATCGAATCTGATACTGAGGCTTCTGTTGAAGCTTCTACTGATCCTCCACAAGAGGATATTGACTCTTCTGATGAACCTACACAAGAGGATATTGACACTTCTGATGAACCTACACAAGAGGAAGTTGACTTCTCATTTGAACAACGAGGAAGGACAGTGGAATATGGTGATTATGAGCAAAGAGAAGAAATCCTCTCTGATTCGGGCTACGTCTCCATGTCCCTCACCCTCGAACTCGTCTCTCAGACCCTACTTCCCAAATCGCCGTCGGCCACCTTGTTCGCTGCTTCCGACGCCGCATTTATCGAATCTGGTCAGCCTCCGCTCTCCCTACTCCAATTCCATTCCTCGCCCCTAGCTTTATCTTTTGAAAGCCTCCGTTCGCTTCCCGTCGGAGCCAAGATTCCGACGATGTTCGCCAACCACTCGTTGATAGTCACCAGCGCCGCTTCCGATTCTCAAATTTCGTTAAACAATGTTAATATCACCTCGTCGCCTTTGTTCGATGATGGTTCTTTGATCATTTTTGGGGTGGATAAGTTCTTCGATCTGAATTTCCCGGCTTTAGGCCTGACTCGAAGCCCTAGCCCTAATACGGGATGCACAGATGATGCAATTGCTTCTTCAGGTGGTGATTCTTTTGATGAAGCAAGCGGAGTGTTAAGGTCCAGAGGATACTTTGTGATGGCTTCGTTTCTTGATTTGCAATTGCTAGGGTTTAGAGATGGCACAAAGATGACAGTTCTCGCCCCAGCTGATGAAGTTATGATGGATCGTGTTGGTAATTTTAGCGACATTTCATCGTCAATCTTTCTTCGGCATGTTCTTCCATGCAAGGTTTCATGGTCTGATCTGGTTAATTTTGATGATGGGTCAATGTTGCCGACATCTTTGGAGGGCTTTACCATTAACATTACGAGATCTGGTGATACATTGAAGCTGAACGAAGTTTCAGTTGCTTTTCCGGACATGTATCACAGTGATTGGCTTGTTGTTCACGGTCTTGGGGAAGTTCTTACCTTGCTGGTGGGACCAGAACAAGCTGCAGACTCTTCGTCTGAAACTGGGGGAAGCAAAACTAATGAACAGACTGCATTAGGCAACAGTGAATTTTAA 1203 0.468 MSLTLELVSQTLLPKSPSATLFAASDAAFIESDTEASVEASTDPPQEDIDSSDEPTQEDIDTSDEPTQEEVDFSFEQRGRTVEYGDYEQREEILSDSGYVSMSLTLELVSQTLLPKSPSATLFAASDAAFIESGQPPLSLLQFHSSPLALSFESLRSLPVGAKIPTMFANHSLIVTSAASDSQISLNNVNITSSPLFDDGSLIIFGVDKFFDLNFPALGLTRSPSPNTGCTDDAIASSGGDSFDEASGVLRSRGYFVMASFLDLQLLGFRDGTKMTVLAPADEVMMDRVGNFSDISSSIFLRHVLPCKVSWSDLVNFDDGSMLPTSLEGFTINITRSGDTLKLNEVSVAFPDMYHSDWLVVHGLGEVLTLLVGPEQAADSSSETGGSKTNEQTALGNSEF* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0457 400 PANTHER OS02G0491300 PROTEIN-RELATED 91 368 - -
Vvi1g0457 400 MobiDBLite consensus disorder prediction 32 71 - -
Vvi1g0457 400 SUPERFAMILY FAS1 domain 259 368 IPR036378 -
Vvi1g0457 400 MobiDBLite consensus disorder prediction 46 70 - -
Vvi1g0457 400 Pfam Fasciclin domain 272 368 IPR000782 -
Vvi1g0457 400 SUPERFAMILY FAS1 domain 92 209 IPR036378 -
Vvi1g0457 400 Gene3D FAS1 domain 253 369 IPR036378 -
Vvi1g0457 400 SMART fasc_3 276 371 IPR000782 -
Vvi1g0457 400 SMART fasc_3 121 214 IPR000782 -
Vvi1g0457 400 MobiDBLite consensus disorder prediction 377 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0457 Vvi-Chr1 4218442 4222267 Dispersed