Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0450 ATGGCTATTGCTTATCCTCATTTTATTGGGTCTGAGAAATCTGCAATGGAGACAGGGATAATATTGTCTCCGTCTTCGCCATCTCCGTCCCTGCCTCATGTGATTCTAACCCAAGATGAGTTGAAGAAAATCGCGGCGTACAAAGCTGTGGAGTACGTTGAGTCCGGTATGGTTCTTGGTCTCGGAACCGGGTCGACGGCGAAGCACGCTGTGGACCGAATAGGCGAGCTTTTGCGGCAAGGGAAGCTGAAGAACATTGTGGGAATACCCACGTCGAAGAAGACCCACGAACAAGCGGTTTCTTTGGGGATTCCCTTGTCGGATCTGGACTCGCATCCGATTTTGGATCTTGCTATCGACGGTGCAGATGAGGTGGACCCGTATCTGAATTTGGTGAAGGGGCGGGGTGGGTCACTGCTGAGGGAGAAGATGGTGGAGGGCGCTTGTAAGAAATTTATTGTGATTGTTGATGAGTCCAAATTGGTCAACCATTTAGGGGGTAGTGGGCTAGCCATGCCGGTTGAGATTGTGCCGTTTTGCTGGAAATTTACTGCTCAAAGGTTGCAAATGTTCTTCGAGGAATCGGGTTGTGTTGCAAAGCTTAGGACATACGAGAATGGGGAACCTTTTGTGACAGATAACAGGAATTATGTCGTGGACTTATATTTCAAGAGAGAAATAGGGGATTTGAAGGTTGCCAGTGATGCCATTCTGCGGCTTGCTGGTGTTGTCGAGCATGGGATGTTTCTTGGCATGGCAACAACTCTTATTGTCGCAGGGGAGTGTGGTGTAGTGGTGAAGGATAAGTAG 810 0.4889 MAIAYPHFIGSEKSAMETGIILSPSSPSPSLPHVILTQDELKKIAAYKAVEYVESGMVLGLGTGSTAKHAVDRIGELLRQGKLKNIVGIPTSKKTHEQAVSLGIPLSDLDSHPILDLAIDGADEVDPYLNLVKGRGGSLLREKMVEGACKKFIVIVDESKLVNHLGGSGLAMPVEIVPFCWKFTAQRLQMFFEESGCVAKLRTYENGEPFVTDNRNYVVDLYFKREIGDLKVASDAILRLAGVVEHGMFLGMATTLIVAGECGVVVKDK* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0450 269 CDD RPI_A 41 260 IPR004788 GO:0004751|GO:0009052
Vvi1g0450 269 FunFam Ribose-5-phosphate isomerase A 164 247 - -
Vvi1g0450 269 NCBIfam ribose 5-phosphate isomerase A 41 264 IPR004788 GO:0004751|GO:0009052
Vvi1g0450 269 Gene3D - 164 247 - -
Vvi1g0450 269 Hamap Ribose-5-phosphate isomerase A [rpiA]. 38 267 IPR020672 GO:0004751|GO:0009052
Vvi1g0450 269 FunFam Ribose-5-phosphate isomerase A 41 175 - -
Vvi1g0450 269 SUPERFAMILY NagB/RpiA/CoA transferase-like 37 186 IPR037171 -
Vvi1g0450 269 Pfam Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 87 261 IPR004788 GO:0004751|GO:0009052
Vvi1g0450 269 SUPERFAMILY D-ribose-5-phosphate isomerase (RpiA), lid domain 170 250 - -
Vvi1g0450 269 Gene3D - 41 261 - -
Vvi1g0450 269 PANTHER RIBOSE-5-PHOSPHATE ISOMERASE 3, CHLOROPLASTIC-RELATED 26 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0450 Vvi-Chr1 4170235 4171044 Dispersed