Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0440 ATGGAGAAAGTGCTGTTGCTGCTACTTCTTTCCCTTGCATCGTCTCCTTCAGTCTTTTCATTCAATGTTCCCGCAATCTTCACGTTTGGAGACTCCATCTTTGATGCTGGAAACAACCATTTTCTCAAGAACTGTACTGCCCAGGCGGATTTCCCCCCTTATGGCTCTAGTTTCTTCCACCACCCCACTGGGAGGTTCACTAATGGAAGAACAGTAGCAGACTTCATTTCCCAGTTCATTGGACTTGATTTACAGAAACCTTACCTTCAGGCACAGATTGAGGTTGTGAACGGAACCCAGAAAAATTATCCTTCCAACGGTATCAACTTTGCTAGTGCTGGCAGTGGGGTATTGAGGGAAACAAATAAGGATATGGGAGTGATACCAATCCAGGACCAGCTACAACAGTTTCAAACACTAGTGCAGCAAAACCAGATTGATTCAAAGCTAGTCCAACAGTCCCTCTTCTTCCTCGAGTCTGGTTCCAATGATGTCTTCAACTACTTCCTCCCTTTTGTCACCCCAACGCTTGATCCAGATGCCTATATGCAAGTCATGTTGACAGAAGTTGTACACTACCTAGACACGATCTATAAGCTCGGTGCTCGCCGCATTGCTGTGTTTGCTCTAGGCCCTGTGGGATGTGTTCCAGCCAGGTCCCTCTTGCCTGGTGCACCCACTGATCGATGTTTTGGGAAGATGAACCACATGGTTAAGCAATACAACCTGGGTTTGGAGAGTTTGGTCAAGGACATTCCCATTAAGTACCCCGGTGCTGTTGGTATCTATGGAGCAGTGTATGATATCGTTCAGCGATTGCGGGCTATTCCTAAACACTATGGTAAATTCCCCAAGCCTTTGAATTTTGCTTCTTTGGTTTAA 882 0.4603 MEKVLLLLLLSLASSPSVFSFNVPAIFTFGDSIFDAGNNHFLKNCTAQADFPPYGSSFFHHPTGRFTNGRTVADFISQFIGLDLQKPYLQAQIEVVNGTQKNYPSNGINFASAGSGVLRETNKDMGVIPIQDQLQQFQTLVQQNQIDSKLVQQSLFFLESGSNDVFNYFLPFVTPTLDPDAYMQVMLTEVVHYLDTIYKLGARRIAVFALGPVGCVPARSLLPGAPTDRCFGKMNHMVKQYNLGLESLVKDIPIKYPGAVGIYGAVYDIVQRLRAIPKHYGKFPKPLNFASLV* 294
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0440 293 Pfam GDSL-like Lipase/Acylhydrolase 26 255 IPR001087 GO:0016788
Vvi1g0440 293 Gene3D SGNH hydrolase 20 289 IPR036514 -
Vvi1g0440 293 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 24 281 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vvi1g0440 Vvi-Chr1 4113940 4115417 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g0440 23 281 Acyl Lipid Metabolism Gene Families AT4G10950 30.741 4.44e-35 129