Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0439 ATGAGAGAGAGCAAAATGAATGAAATGGAGGAGTTGTTCGGAGAAGCCAGAAGAGCAGCCGATGATTTGTACCAACTCCGAGACACGTATTTTCCGGCGAATCCAGCTGAAAAAATCTCCGAACTGCAGCGGAAATCAGATCTCGCTCTCTCGCTCCTCGATTCCCTTCCTCTTGAACAAAGGAGATTACCAATACAACGTAGGACTTATGAATTTTTGAGAGGAAAGATACTGGATGTATTTCCTGATTATAGGAAAGAAGCAGAAGATCATCTCTCTAAAGCTGTTAAGTTGAATCCATCTCTTGCAGATGCTTGGCTATGTTTAGGTAACTGCATTTGGAAGAAGGGAGATCTAGCTTCAGCCAAAAACTGCTTCACTCTTGCACTCGGCAAGGGTTCAAACAAGGAGATACTTTGTCAATTATCAATGCTTGAAAGAAGGATGGCTCCAGGTTCTGAAAATCAAGCAGAAATTGTTGAAGAAAGCATCCAACATGCCAAGGAAGCTATTACTTTGGACGTCAAGGATGGAAATTCGTGGTACAACCTTGGAAATGCTTGCCTCACAAGTTTTTTTGTGACTGGAGCATGGGATCATAGCAAGCTTCTGCAATCATTAAAGGCGTACCAAAATGCTGAAAAAGATGAAAGGATGAAATCCAATCCAGACCTGTATTTCAACTGTGCCACTGTCAACAAATATCTAGAAAACTATGAGAGAGCCCTTAGTGGCTTTGAAGCTGCTGCCTTAAAGGATCCTGGTCTAAATGCTGTTGAGGAGGTTCAAAAGATTGTTGATCTTCTCAACAAGTTAGAGAGCTTGTTGAAGGGCCAGGCTAGGGCTAAACGACATGCGGCTTTAGCATCCTCACGAGCTGCTGACAATTTGAATCCTTCGTACAAAAGAATCACCATAGATATTCTGTCAGAGGGTCTGAACAAAGCAGTAGCAATTGTGGGAAAAGTTCTTCTGTTTGTTAAGCACGAGAGTGTTGCTCCATTATACTATTTGGTATGCGATTCAAATCAAATATGCTATGTTCTCTCAGTGTATGGCATAAGCAATGATGCGATTAAAGAAGGAGATCAGCTAACGCTATTGGAACCTTATTACCGTCATGTTGATTTGTCATGGAAGGGAAAGTGTTACCAGTTCAAATCAATTCGTGTGGACTTCTTAGAACAAGTGCTTGTTAATGGAAAAGCTCTGGCTTGTCATCAGGCAGTTCGGACTTCAATTTATGCACAACACAAACCATGA 1263 0.4165 MRESKMNEMEELFGEARRAADDLYQLRDTYFPANPAEKISELQRKSDLALSLLDSLPLEQRRLPIQRRTYEFLRGKILDVFPDYRKEAEDHLSKAVKLNPSLADAWLCLGNCIWKKGDLASAKNCFTLALGKGSNKEILCQLSMLERRMAPGSENQAEIVEESIQHAKEAITLDVKDGNSWYNLGNACLTSFFVTGAWDHSKLLQSLKAYQNAEKDERMKSNPDLYFNCATVNKYLENYERALSGFEAAALKDPGLNAVEEVQKIVDLLNKLESLLKGQARAKRHAALASSRAADNLNPSYKRITIDILSEGLNKAVAIVGKVLLFVKHESVAPLYYLVCDSNQICYVLSVYGISNDAIKEGDQLTLLEPYYRHVDLSWKGKCYQFKSIRVDFLEQVLVNGKALACHQAVRTSIYAQHKP* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0439 420 Pfam Tetratricopeptide repeat protein 5 OB fold domain 301 412 IPR032076 -
Vvi1g0439 420 SUPERFAMILY TPR-like 75 247 IPR011990 GO:0005515
Vvi1g0439 420 Gene3D Tetratricopeptide repeat domain 5 279 IPR011990 GO:0005515
Vvi1g0439 420 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 43 398 - -
Vvi1g0439 420 SMART tpr_5 103 136 IPR019734 GO:0005515
Vvi1g0439 420 SMART tpr_5 223 256 IPR019734 GO:0005515