Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0438 ATGGCCGCGCCACCGTCGTCGTCGGCCACCGCTAGCATCATGCTCGCAATTTACGAGAAGAAGACCGTTACAGTCGAACTCTATCGCCCTCTCCGCCAGTACATCGCCTTTACCTACTCGGAGCGGGAAGCCCAAAATCTAGAAGATGATCTCCAGGCCCTCAAACAAATGCGCTCCGATCTTGAACGTCCCGGCGATTCCCTCCCCACCCGGAGAGACCTGCTTCAGTCCTACTTCAAAGCCCTGTGTCTTGTGGAGTCACGGTTCCCAATTTCGCCTGACAGGGACCACATCAACAGCATCACTTTCACGTGGTACGACGCCTTCAAGCAGAAGCAGAAGGCCTCTCAGCAGAACATCCACTTGGAGAAGGCTGCAGTTCTGTTCAATCTCGGCGCCGTCTACAGCCAGCTTGGGCTCTTCTACGATCGGTCATCGGTGGATGGTATGCGCCAGGCTGCGCAGGCGTTTATTGCTGCCGCCGGTGCGTTTGCCTTCTTGAGGGATAATGCGGCCATGAAGGCATCGATAGGGAGCTCCACGACGGTGGACGTTTCGGTGGAGTGTGCTGGGATGTTGGAGCGGCTGATGCTTGCTCAAGCTCAGGAGTGTGTGTTTGAGAATACTATTGCCAAAGGAAGTACGCCGATGGTCTGTACCAAGATTGCTAGGCAGGTTGGGCTTTACTATGAGGAAACTTTTGCCGCACTGAATGTTGCACCTCTGAATCAGCACTTTGACAAGACATGGATATCTCACATCCAGCTCAAGGCAGCCTTGTTTTATGGTGAGGCTTGCTATAGGTATGGTTTAGAGCTGCATCAGAAAGAAGAGATTGCAGAGGAAATTGCAAGGTTGAAGAGTGGGATAAGTGCTTTATCTGAGGCAAAGAAATCCTCAAAGGGAGCTGCTGCACAGATTTTGGATACAATTACAAAGTTAGAGACCAATCTTAATCGAAACTTAGAAAGGGCTGTGAAGGAGAATGATAGAGTGTACCTCATGAGGGTTCCTTCCCCCAGTACCCTACCACCTCTTCCAGCTTTTTCCATGGTTAAGTCGATGCCGATGAATGAGGTCCTGGATGCCAGCAAGGAGAGGATGTTTTCAAGTCTTGTTCCAGACAGCAGTGCAAAGGCTCTTTCAAGGTACACAGAAATGGTTGATGACATCATCAGAACACAAGCTGAAAAATTGCAACAAGGAAGTGAGCTAGCTCGAGTGAGGCTCAAGGAAATGGACCTGCCAGATTCTATTCTTGCTTTGGAAGGGAATTTCACTTTACCAACAGATCTTAAAGAAGATGTTGAGGCAGTGCAGATTTGTGGGGGCCCAGCAGGTTTGGAAGCTGAGTTGCAGCAACTTATGGATCTGAGGAGGGTGAACCAGGAACTGCTGGTTCAGACTGATGAGCTCTTGCAGAAGGAAGCAAGGGAAGATGGTCAGTTTAGAAGCCAATTTGGAACGCGGTGGACTAGGCCTCAGTCCAGCACTTTAACAAAGAATCTGCAGGACAGATTAAACAGATTTGCAGCAAACTTGAAGCAAGCTTCTGAAAGTGATGCAAGGATCGAGCGTTCAGTGAGAGAGCATATGGCACTCATGTCAATCCTTGATCGTCGTCCGATAGAATCAGCACTTCCAACCCTGGCTAGACCAATAATGTCTTTGGATGCCAATGAAGATGCTATAGTGGGGGCCCTGAAGCAAAGCTTGAGGCAATTGGAGACTCTTGGGGCACAACGGGCGGGTCTTGAAGACATGCTTAAAGAGATGAAAAGGAAGGATGATATACTGCCCAAGTTGATGACATCCACTGGCTCCTATGAAGACCTTTTCAGGAAGGAGATAGCAAAGTATGATAATATTTGTGAAGATATTGCCCAAAATCTTGAGGCACAAGAACAACTGTTGCTGCAAATACAGGCTCAAAATGATGAGTTTGCTGCAATCTTTAATCTTGAAGATTATAAAGCATCCCGTGAGAAGAGTTACAAGCAGATTGCAGCTGCCATAGCAAAGTTCCGAGAAATTAAGGAGAACATTAATGAGGGACTGAAGTTCTATGTGACTCTTCAGGATGCAATCACAAACATAAAGCAGCAGTGCAGCGATTTTGTGATGACCAGAAACATCCAGTGCCGAGAGATGATTGAAGATGTACAGAGACAAATGGCAGGTCTCAGTTTCCAGGATGGTAAGAACACTGGTGCTTACAACTACCCTTCTGTGAGTCAACCCCATCAAACTCAGAGAGCCACTTCTCAGCAGCAAACAGAACCTGTGAACATGACTCATCCTTCTCGCCCCCAAGCACCTTATTACCAGCCGCCACCTCCTGAGCAGCCGACAATGCCAGGATATGCTCACTCCCTCCCTCCTTATGGCTCTACACAGCAGCCACCACCTCCTTACCATGTTGCAGGTGGCCCATACCATCCCCAACAGGCCCAACAGCCACCACCTAGCCATGAGTATGGCCAACCTGCTTATCCAGGGTGGCGAGGTCCATACTATAATAATGCTCATGCACAGCAACCTGGATCTCTTCCTCGTCCTCCTTACACCATTCCAGCCCCTTATCCTCCTCACCACCAAAGCGGCTACTACAAGCAGCAATAG 2622 0.4889 MAAPPSSSATASIMLAIYEKKTVTVELYRPLRQYIAFTYSEREAQNLEDDLQALKQMRSDLERPGDSLPTRRDLLQSYFKALCLVESRFPISPDRDHINSITFTWYDAFKQKQKASQQNIHLEKAAVLFNLGAVYSQLGLFYDRSSVDGMRQAAQAFIAAAGAFAFLRDNAAMKASIGSSTTVDVSVECAGMLERLMLAQAQECVFENTIAKGSTPMVCTKIARQVGLYYEETFAALNVAPLNQHFDKTWISHIQLKAALFYGEACYRYGLELHQKEEIAEEIARLKSGISALSEAKKSSKGAAAQILDTITKLETNLNRNLERAVKENDRVYLMRVPSPSTLPPLPAFSMVKSMPMNEVLDASKERMFSSLVPDSSAKALSRYTEMVDDIIRTQAEKLQQGSELARVRLKEMDLPDSILALEGNFTLPTDLKEDVEAVQICGGPAGLEAELQQLMDLRRVNQELLVQTDELLQKEAREDGQFRSQFGTRWTRPQSSTLTKNLQDRLNRFAANLKQASESDARIERSVREHMALMSILDRRPIESALPTLARPIMSLDANEDAIVGALKQSLRQLETLGAQRAGLEDMLKEMKRKDDILPKLMTSTGSYEDLFRKEIAKYDNICEDIAQNLEAQEQLLLQIQAQNDEFAAIFNLEDYKASREKSYKQIAAAIAKFREIKENINEGLKFYVTLQDAITNIKQQCSDFVMTRNIQCREMIEDVQRQMAGLSFQDGKNTGAYNYPSVSQPHQTQRATSQQQTEPVNMTHPSRPQAPYYQPPPPEQPTMPGYAHSLPPYGSTQQPPPPYHVAGGPYHPQQAQQPPPSHEYGQPAYPGWRGPYYNNAHAQQPGSLPRPPYTIPAPYPPHHQSGYYKQQ* 874
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0438 873 Coils Coil 624 644 - -
Vvi1g0438 873 PANTHER PCD6 INTERACTING PROTEIN-RELATED 9 861 - -
Vvi1g0438 873 SMART BRO1_2 13 396 IPR004328 -
Vvi1g0438 873 MobiDBLite consensus disorder prediction 737 770 - -
Vvi1g0438 873 CDD BRO1_Alix_like_1 14 368 - -
Vvi1g0438 873 MobiDBLite consensus disorder prediction 737 873 - -
Vvi1g0438 873 CDD V_Alix_like_1 374 710 - -
Vvi1g0438 873 ProSiteProfiles BRO1 domain profile. 13 406 IPR004328 -
Vvi1g0438 873 Pfam BRO1-like domain 14 391 IPR004328 -
Vvi1g0438 873 Coils Coil 276 296 - -
Vvi1g0438 873 MobiDBLite consensus disorder prediction 771 787 - -
Vvi1g0438 873 Gene3D alix/aip1 like domains 8 373 IPR038499 -
Vvi1g0438 873 Gene3D alix/aip1 like domains 420 700 - -
Vvi1g0438 873 Pfam ALIX V-shaped domain binding to HIV 428 712 IPR025304 GO:0005515
Vvi1g0438 873 Coils Coil 448 468 - -
Vvi1g0438 873 Gene3D alix/aip1 in complex with the ypdl late domain 374 652 - -
Vvi1g0438 873 Coils Coil 500 520 - -
Vvi1g0438 873 Coils Coil 37 64 - -
Vvi1g0438 873 Coils Coil 575 595 - -