Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0431 ATGGCTATGGAAGGTGGAGAAACTACATGTCTTCAATCTCCTCTGATTGGACATCAAGGGGACAGTCATGAATTTGATGGAGGAACATCTGGGCAAGGTTGTTGCAGAAGAGAGATTATTGAAGAAGCAAAGAAGCAGCTGTGGCTGGCAGGGCCTCTTGTGGCAGTCAGCATGTTGCAGTACTGTTTACAAGTAATCTCCATCATGTTTGTAGGCCATCTTGGGGAGTTGCCACTCTCTGGTGCTTCCATGGCCACTTCATTTGCTTCAGTCACTGGTTTCAGCTTATTGTTAGGAATAGGAAGTGCATTGGAGACACTTTGTGGGCAAGCCTATGGAGCCAGAGAGTACCACATGGTGGGTATTCACACACAAAGAGCAATGCTAACCCTTCTTGTCTTGAGCATTCCCCTTGCATTTATATGGTTCTTCACGGCCCCTATTCTCATATCTCTGGGCCAAGATCGCCGCATATCTACAGAAGCAGGGATATTCAATAGGTGGATGATCCCAAGCCTTTTTGCCTACGGCCTCCTGCAATGTCTCAACAGATTTCTGCAGACACAAAACATTGTTTTCCCTATAATGATAAGCTCAGGGATCACAGCTGTTTCCCATATCCTCGTTTGTTGGCTTCTTGTCTTTAAATCTGGTCTTGGAAGCAAAGGAGCAGCCTTGGCAAACACCATCTCGAATTGGGTTAATGTATTTATGTTGGCAGTTTATGTGAAGTTTTCCCCTGTTTGCTCAAAAACTTGGACCGGGTTATCAAAACAAGCACTTCATGATATTCCCAACTTTTTGAAGCTTGCAGTACCTTCTGCTACTATGATCTGCTTTGAATATTGGACATTCGAGATGATTGTTCTCCTCTCTGGCCTTCTCCCAAATCCCAAACTAGAGGCATCTGTGTTATCGATAAGCCTTAACACATGTTGGATGGTCTACACAATCTCTGTTGGTCTTGGTGGAGCTATAAGGTCAGTCTTGCAGTACATAATGGCAATTTTTGTCACATTCCTCATCAAATTCCATTTGTACAGCAACCTGCATCAAAAGAAAACAGAAGTCCTAAAAGAATTATATTTTCCTCTTAGTTTTTGGGTTTATACTGTTGATCAGCAACCATCTTTTCATATTATGTTGTATTGTAGTACAAGAGTTTCAAACGAACTAGGTGCCAAGCACCCACAACATGCACGCTTGGCAGTATGGGTAGTGATTATAATTTCCATATCAGAGGGTGTCGTGGTTGGAACCGCTACTATTTTGGTACGCCATGTCTGGGGAAAGCTATATAGCAATGAAGCAGAAGTTATCAGATATGTGGCTAAAATGATGCCACTTCTTGCATTATCTAACTTCTTGGATGGATTCCAATGTGTGCTTTCAGGGGCTGCTAGAGGATATGGATGGCAAAATATTTGCACAATTATCAACCTTGGAGCTTATTACATCGTGGGAATTCCTTGTTCTGTGCTATTTGCTTTTATATGCAATTTTGGAGGCATGGTAAGTTTCTCTCCTAAGTTCTGTATTTTCGTTATTTCAAAGGAATTGAAATTTTTATGGCTCAGGGGCTTTGGATGGGAATCATTTGTGGCCTTGGCATACAAGTGA 1620 0.4222 MAMEGGETTCLQSPLIGHQGDSHEFDGGTSGQGCCRREIIEEAKKQLWLAGPLVAVSMLQYCLQVISIMFVGHLGELPLSGASMATSFASVTGFSLLLGIGSALETLCGQAYGAREYHMVGIHTQRAMLTLLVLSIPLAFIWFFTAPILISLGQDRRISTEAGIFNRWMIPSLFAYGLLQCLNRFLQTQNIVFPIMISSGITAVSHILVCWLLVFKSGLGSKGAALANTISNWVNVFMLAVYVKFSPVCSKTWTGLSKQALHDIPNFLKLAVPSATMICFEYWTFEMIVLLSGLLPNPKLEASVLSISLNTCWMVYTISVGLGGAIRSVLQYIMAIFVTFLIKFHLYSNLHQKKTEVLKELYFPLSFWVYTVDQQPSFHIMLYCSTRVSNELGAKHPQHARLAVWVVIIISISEGVVVGTATILVRHVWGKLYSNEAEVIRYVAKMMPLLALSNFLDGFQCVLSGAARGYGWQNICTIINLGAYYIVGIPCSVLFAFICNFGGMVSFSPKFCIFVISKELKFLWLRGFGWESFVALAYK* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0431 539 PANTHER MULTIDRUG RESISTANCE PROTEIN 36 326 - -
Vvi1g0431 539 Pfam MatE 385 493 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Vvi1g0431 539 Pfam MatE 52 212 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Vvi1g0431 539 CDD MATE_eukaryotic 42 504 IPR045069 GO:0042910|GO:1990961
Vvi1g0431 539 NCBIfam MATE family efflux transporter 52 329 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0431 Vvi-Chr1 4036753 4039385 Dispersed/Tandem