Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0430 ATGGAAGAGAATCTGTTGGTGAAAGGGAACGGTGGAGAGAAGAGGGAGGAGGAGGGTTTAAGATGGGTTTTGGTGTGTGAAGAAGTGAAGAGGCTGGGTTGCTTGGCTGCACCCATGGTTGCTGTGGTTCTATCGCAATACTTGGTACAAGTTGTATCTGTAATGATGGTTGGACACCTGGGTGAGCTTGCTCTCTCCAGCACCGCCATAGCCATCTCTCTCTCCGGCGTCAGTGGCTTTAGTCTTCTTCTAGGAATGGCTAGTGCATTGGAGACTCTATGTGGGCAAGCTTATGGAGCAAAACAATATAGCAAGCTAGGAACTCAAACTTACACTGCCATTTTCTCGCTTTTCTTGGTTTGTCTTCCACTCTCTGTCATATGGATCTACATGGGAAAACTGCTCACTTTCATGGGCCAAGACCCTTTGATTTCATATGAAGCTGGTAAATTCACAATGTGGCTTGTTCCTGCACTATTTGCTTATGCGACTCTTCAGCCACTTGTTCGGTACTTTCAAACACAAAGTTTGACCATGCCCATGCTCCTAAGTTCTTGTGCTGCTCTTTGTTTCCATATGCCTCTATGTTGGGTTTTGGTTTTCAAGTCAGGACTAGGTAACCTTGGAGCAGCACTGGCAATTAGCATTTCATATTGGTTGAATGCGATCTTCCTGGTATTGTACATGAAGTACTCTTCTGCTTGTGAGAAAACCCGTGTTCCAGTTTCTATGGAGGTGTTTCAAGGAATGGGAGAGTTTTTCCGCTTTGCTATCCCTTCTGCTGTAATGATTTGTCTAGAATGGTGGTCATTTGAACTGCTCATCTTGCTGTCCGGGCTTTTACCCAACCCTGAGCTTGAAACCTCTGTTCTTTCTGTATGTCTCAACACCATCTCAACACTCTATACGATACCATATGGACTAGGTGCTGCTGGAAGCACTAGAGTTTCAAATGAACTGGGAGCGGGGAACCCACAAAAGGCACGTTTAGCGGTCTATGCACTCATGTTTCTTGCAGTCACAGAGACAGCTTTAGTGAGCACAACCCTTTTTGCCAGTCGTCGTGTTTTTGGTTACTTGTTCAGCAACGAGAAGGAGGTCGTGGATTATGTCACAAACATGTCTCCTCTGGTTTGTCTGTCCGTCATATTGGACAGCATGCAAGGGGTTCTTTCTGGTGTTGCTAGGGGATGTGGGTGGCAGCATATAGGGGCTTTTATCAATCTTGGAGCCTTTTATCTTTGTGGCATCCCAGTAGCTGCCACATTGGCGTTCTGGTTACAGTTAAGAGGAAGAGGCCTCTGGATTGGAATACAAACTGGTGCTCTTTTACAAACAACTCTGCTCTGCGTTATGACTGGTTTTACAAATTGGGAAAAACTGGCAACTAAAGCAAGGCAGCGAATATTTGAGGGAAGATATTCAGTTGAAGATAGACTGATGTGA 1446 0.4537 MEENLLVKGNGGEKREEEGLRWVLVCEEVKRLGCLAAPMVAVVLSQYLVQVVSVMMVGHLGELALSSTAIAISLSGVSGFSLLLGMASALETLCGQAYGAKQYSKLGTQTYTAIFSLFLVCLPLSVIWIYMGKLLTFMGQDPLISYEAGKFTMWLVPALFAYATLQPLVRYFQTQSLTMPMLLSSCAALCFHMPLCWVLVFKSGLGNLGAALAISISYWLNAIFLVLYMKYSSACEKTRVPVSMEVFQGMGEFFRFAIPSAVMICLEWWSFELLILLSGLLPNPELETSVLSVCLNTISTLYTIPYGLGAAGSTRVSNELGAGNPQKARLAVYALMFLAVTETALVSTTLFASRRVFGYLFSNEKEVVDYVTNMSPLVCLSVILDSMQGVLSGVARGCGWQHIGAFINLGAFYLCGIPVAATLAFWLQLRGRGLWIGIQTGALLQTTLLCVMTGFTNWEKLATKARQRIFEGRYSVEDRLM* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0430 481 NCBIfam MATE family efflux transporter 38 435 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Vvi1g0430 481 CDD MATE_eukaryotic 28 464 IPR045069 GO:0042910|GO:1990961
Vvi1g0430 481 PANTHER MULTIDRUG RESISTANCE PROTEIN 24 458 - -
Vvi1g0430 481 Pfam MatE 259 421 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Vvi1g0430 481 Pfam MatE 38 198 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0430 Vvi-Chr1 4032048 4035573 Dispersed/Proximal