Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0426 ATGGGAAGCACCAGTGGTTTCTTCTCTCTTCTTCGCATCAACAACTGCTGTTTTTTTAATCAGCTCCACCCTATCAGACACCACAAACCTCCCCTGCAAATCCACCGCAGGAGAGCACCGGGCTTTGGGCCATCTCAGAGGCTCCGCCTTAGAAATTTCAGCACGCTTGTTTGTTCTGCCGTTGAAGATGATGCGAGGGATAAGCAGCAGCAACTGGGTGGCGGTGTTGGGTCAATTGTTGAGGAGAGGCCTGTGGCTGAGGACTCAGGTGAAGATACACTGCAAAACGTTGACCAAGATAAAAAAGAAAATGGTCTTTATGATTTTCTTTATCCCAGTAAAGAGCTCCTGCCAGATGATAAAGAAATGTCCATATTTGATCATCTAGAGGAGCTACGTCAGAGAATATTTGTGTCAGTTTTGGCAGTTGGAGCTGCCATGTTGGGATCTTTTGCATTTTCAAAAGAACTGGTTATGATTCTTGAAGCTCCTGTTAAAGAACAGGGTGTTCGATTTCTGCAACTGGCTCCTGGAGAGTTTTTCTTTACAACTTTGAAGGTATCAGGATACTGTGGTCTTCTCTTGGGGAGCCCCATCATCTTATATGAAATTATAGCTTTTGTTCTTCCAGGTTTAACAAAGGCAGAGAGAATGTTTCTGGGGCCAATTGTATTAGGGTCCTCAGTACTTTTCTACGCTGGTATCATCTTCTCCTACTCGATTCTCACCCCGGCAGCCTTGAATTTCTTTGTTAATTACGCAGAAGGAGCTGTGGAATCTTTGTGGTCTATTGATCAATACTTTGAGTTTGTCTTTGTGCTCATGTTCAGCACTGGTTTGTCTTTTCAGGTTCCAGTCATACAACTTCTACTGGGACAAGTTGGTGTAGTGTCAGGAGATCAAATGCTGTCAATTTGGAGATATGTCGTGGTTGGTGCTGTTGTGGCTGCTGCAGTTCTTACTCCATCAACTGATCCTCTAACTCAGGTGCTTCTGGCAGGGCCCCTTTTGGGTCTCTACTTGGGTGGGGCATGGATGGTAAAGCTTATGGGGCGGTGA 1059 0.4523 MGSTSGFFSLLRINNCCFFNQLHPIRHHKPPLQIHRRRAPGFGPSQRLRLRNFSTLVCSAVEDDARDKQQQLGGGVGSIVEERPVAEDSGEDTLQNVDQDKKENGLYDFLYPSKELLPDDKEMSIFDHLEELRQRIFVSVLAVGAAMLGSFAFSKELVMILEAPVKEQGVRFLQLAPGEFFFTTLKVSGYCGLLLGSPIILYEIIAFVLPGLTKAERMFLGPIVLGSSVLFYAGIIFSYSILTPAALNFFVNYAEGAVESLWSIDQYFEFVFVLMFSTGLSFQVPVIQLLLGQVGVVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQVLLAGPLLGLYLGGAWMVKLMGR* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0426 352 Hamap Sec-independent protein translocase protein TatC [tatC]. 120 352 IPR002033 GO:0016020
Vvi1g0426 352 NCBIfam twin-arginine translocase subunit TatC 125 340 IPR002033 GO:0016020
Vvi1g0426 352 ProSitePatterns TatC family signature. 267 286 IPR019820 -
Vvi1g0426 352 PRINTS Bacterial Sec-independent translocation TatC protein family signature 124 151 IPR002033 GO:0016020
Vvi1g0426 352 PRINTS Bacterial Sec-independent translocation TatC protein family signature 198 216 IPR002033 GO:0016020
Vvi1g0426 352 PRINTS Bacterial Sec-independent translocation TatC protein family signature 267 295 IPR002033 GO:0016020
Vvi1g0426 352 PRINTS Bacterial Sec-independent translocation TatC protein family signature 216 242 IPR002033 GO:0016020
Vvi1g0426 352 Pfam Sec-independent protein translocase protein (TatC) 127 335 IPR002033 GO:0016020
Vvi1g0426 352 PANTHER SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATC 104 352 IPR002033 GO:0016020