Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0422 ATGGAACCTAATGGTCATAGGAGGGCAAGGAGAAAGGATTCTGCTGTTCAAGCAAATGGTAACGGCAGCTTATCAAGTGTTGGTGATGAACATGATCCATGGACTGCATGGGCATACAAACCTCGTACCATTTCATTATTACTTATTGGTGCATGTTTTCTTATTTGGGCAAGTGGGGCTCTGGATCCGGAAAGTAGGTCATCTGGCAATCTTGTTACTTCTGTGAAAAGGGGTGTATGGGCGATGATTGCAGTTTTTCTTGCTTACTGCTTGCTGCAAGCCCCTTCAACGGTACTTATTAGGCCACATCCAGCAATTTGGCGACTAGTTCATGGGATGGCGGTCATTTACCTTGTTTGTCTCACATTTTTGCTTTTCCAGAAACGTGATGATGCTCGGCAATTCATGAAGTTTCTCCATCCTGATCTTGGTGTTGAACTTCCTGAAAGATCGTATGGTGCTGATTGCCGCATTTATGTGCCTGAAAATCCAACCAGCAGGTTTAAGAATGTTTATGAAACCCTTTTTGATGAATTTGTTGTGGCTCATATATTTGGATGGTGGGGTAAGGCTATAATGATTCGCAATCAGCCCCTCCTATGGGTGCTGTCAATTGGATTTGAGCTAATGGAGCTTACTTTCCGCCATATGTTACCAAACTTCAATGAGTGTTGGTGGGACAGTATTATCCTCGACATTTTAGTCTGCAATTGGTTTGGTATTTGGGCTGGAATGCATACTGTTAGATATTTTGATGGAAGAACATACGAGTGGGTTGGTATAAGCCGGCAGCCCAATATTATTGGCAAAGTGAAACGAACATTAGGACAATTTACGCCAGCACAGTGGGACAAAGATGAGTGGCATCCCTTGCTTGGTCCATGGCGTTTCATTCAAGTTCTCAGTCTTTGCATTGTATTCTTGACAGTGGAGCTTAATACATTCTTTCTTAAGTTTTGTCTTTGGATTCCTCCTCGAAACCCTGTGATTGTGTATCGGTTGATCTTGTGGTGGCTAATTGCAATACCAACAATTCGTGAGTACAATTCATACTTACAGGACAGAAAACCAGTGAAAAAGGTGGGAGCGTTTTGTTGGCTTTCCCTTGCTATTTGCATTATTGAACTACTCATTTGCATCAAGTTTGGACATGGCCTATTTCCCAAACCAATGCCTCTATGGTTGGTAATTTTCTGGATGTCTGCTGGGGTGGCCCTTTTAATATTTCTGATTGTGTGGTCGTGGCAACTACATCAAACTCTGGGGAGAAAGAGACGATGA 1281 0.427 MEPNGHRRARRKDSAVQANGNGSLSSVGDEHDPWTAWAYKPRTISLLLIGACFLIWASGALDPESRSSGNLVTSVKRGVWAMIAVFLAYCLLQAPSTVLIRPHPAIWRLVHGMAVIYLVCLTFLLFQKRDDARQFMKFLHPDLGVELPERSYGADCRIYVPENPTSRFKNVYETLFDEFVVAHIFGWWGKAIMIRNQPLLWVLSIGFELMELTFRHMLPNFNECWWDSIILDILVCNWFGIWAGMHTVRYFDGRTYEWVGISRQPNIIGKVKRTLGQFTPAQWDKDEWHPLLGPWRFIQVLSLCIVFLTVELNTFFLKFCLWIPPRNPVIVYRLILWWLIAIPTIREYNSYLQDRKPVKKVGAFCWLSLAICIIELLICIKFGHGLFPKPMPLWLVIFWMSAGVALLIFLIVWSWQLHQTLGRKRR* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0422 426 MobiDBLite consensus disorder prediction 1 29 - -
Vvi1g0422 426 Pfam Phosphatidyl serine synthase 102 382 IPR004277 GO:0006659|GO:0106245
Vvi1g0422 426 PANTHER PHOSPHATIDYLINOSITOL SYNTHASE 30 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0422 Vvi-Chr1 3985489 3993131 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g0422 1 426 Acyl Lipid Metabolism Gene Families AT1G15110 82.160 0.0 738